BLASTX nr result

ID: Coptis21_contig00032175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032175
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29820.3| unnamed protein product [Vitis vinifera]              178   6e-43
ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257...   178   6e-43
ref|XP_002533439.1| conserved hypothetical protein [Ricinus comm...   167   1e-39
ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|2...   162   6e-38
ref|XP_003535869.1| PREDICTED: uncharacterized protein LOC100775...   159   5e-37

>emb|CBI29820.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  178 bits (452), Expect = 6e-43
 Identities = 91/136 (66%), Positives = 108/136 (79%), Gaps = 3/136 (2%)
 Frame = +3

Query: 210 CRWFVTPSGLIPSQPTLGRKVTGTLFGYKKGHVTFTVQEDPRSDPVFVLELAXXXXXLVK 389
           CRW   P+ L  + P+LGRKVTGTLFG+++GHV+F VQ+DPRS+PV +LELA     LVK
Sbjct: 97  CRWLSIPNHLSIT-PSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELATSTSTLVK 155

Query: 390 EMSSGLVRIALEC-KIGT--RPMKLFQEPIWTMYFNGKKFGYAMSRACGEYEWHVLSTVQ 560
           EMSSGLVRIALEC K+    RP+KLFQEP+WTMY NG+K GYAMSR CGE++ HVLSTVQ
Sbjct: 156 EMSSGLVRIALECEKVAARGRPVKLFQEPMWTMYCNGRKCGYAMSRECGEFDRHVLSTVQ 215

Query: 561 TVSTGAGVIPVDAKSK 608
           +VS GAGVIP D   K
Sbjct: 216 SVSAGAGVIPTDDNRK 231


>ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257201 [Vitis vinifera]
          Length = 262

 Score =  178 bits (452), Expect = 6e-43
 Identities = 91/136 (66%), Positives = 108/136 (79%), Gaps = 3/136 (2%)
 Frame = +3

Query: 210 CRWFVTPSGLIPSQPTLGRKVTGTLFGYKKGHVTFTVQEDPRSDPVFVLELAXXXXXLVK 389
           CRW   P+ L  + P+LGRKVTGTLFG+++GHV+F VQ+DPRS+PV +LELA     LVK
Sbjct: 80  CRWLSIPNHLSIT-PSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELATSTSTLVK 138

Query: 390 EMSSGLVRIALEC-KIGT--RPMKLFQEPIWTMYFNGKKFGYAMSRACGEYEWHVLSTVQ 560
           EMSSGLVRIALEC K+    RP+KLFQEP+WTMY NG+K GYAMSR CGE++ HVLSTVQ
Sbjct: 139 EMSSGLVRIALECEKVAARGRPVKLFQEPMWTMYCNGRKCGYAMSRECGEFDRHVLSTVQ 198

Query: 561 TVSTGAGVIPVDAKSK 608
           +VS GAGVIP D   K
Sbjct: 199 SVSAGAGVIPTDDNRK 214


>ref|XP_002533439.1| conserved hypothetical protein [Ricinus communis]
           gi|223526713|gb|EEF28946.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  167 bits (423), Expect = 1e-39
 Identities = 86/140 (61%), Positives = 105/140 (75%), Gaps = 6/140 (4%)
 Frame = +3

Query: 210 CRWFVTPSGLIPSQPTLGRKVTGTLFGYKKGHVTFTVQEDPRSDPVFVLELAXXXXXLVK 389
           C+W   P+ L   + +LGRKVTGTLFG+++GHV+F VQ+DPRS+PV +LELA     LVK
Sbjct: 91  CKWLSIPTHL-SIKSSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELAMSTSTLVK 149

Query: 390 EMSSGLVRIALEC-KI-----GTRPMKLFQEPIWTMYFNGKKFGYAMSRACGEYEWHVLS 551
           EMSSGLVRIALEC K+     GTR  KLF EP WTMY NG+K GYA+SR C E +WHVL+
Sbjct: 150 EMSSGLVRIALECDKVQVPTNGTRSGKLFNEPTWTMYCNGRKCGYAVSRTCTELDWHVLN 209

Query: 552 TVQTVSTGAGVIPVDAKSKK 611
           TVQ+VS GAGVIP+    +K
Sbjct: 210 TVQSVSVGAGVIPMVEDGRK 229


>ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|222853997|gb|EEE91544.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  162 bits (409), Expect = 6e-38
 Identities = 83/141 (58%), Positives = 101/141 (71%), Gaps = 7/141 (4%)
 Frame = +3

Query: 210 CRWFVTPSGLIPSQPTLGRKVTGTLFGYKKGHVTFTVQEDPRSDPVFVLELAXXXXXLVK 389
           C+W  TP+  +   P+LGRKVTGTLFG + GHV+F VQ+DP S+PV +LEL+     LVK
Sbjct: 28  CKWLSTPTQYLSLTPSLGRKVTGTLFGNRHGHVSFAVQDDPGSEPVLLLELSISTAMLVK 87

Query: 390 EMSSGLVRIALEC------KIGT-RPMKLFQEPIWTMYFNGKKFGYAMSRACGEYEWHVL 548
           EMSSGLVRIALEC      ++ T RP KLF EP WTMY NG+K GYA+SR C   +W+VL
Sbjct: 88  EMSSGLVRIALECEKVRAPQVQTGRPGKLFNEPTWTMYCNGRKCGYAVSRRCTYSDWYVL 147

Query: 549 STVQTVSTGAGVIPVDAKSKK 611
            TVQ+VS GAGVIPV    +K
Sbjct: 148 GTVQSVSVGAGVIPVVEDGRK 168


>ref|XP_003535869.1| PREDICTED: uncharacterized protein LOC100775417 [Glycine max]
          Length = 296

 Score =  159 bits (401), Expect = 5e-37
 Identities = 90/177 (50%), Positives = 110/177 (62%), Gaps = 15/177 (8%)
 Frame = +3

Query: 108 QNQTSLSQPNKPKPITKLAXXXXXXXXXXXXXXXCRWFVTPSGLIPSQPTLGRKVTGTLF 287
           Q+   L+Q NK   I+ L                C+W   PS L  + P+LGRKVTGTLF
Sbjct: 66  QHTPKLTQQNK---ISSLIRSFLNIFTFPTMIPTCKWLTIPSQLSVT-PSLGRKVTGTLF 121

Query: 288 GYKKGHVTFTVQEDPRSDPVFVLELAXXXXXLVKEMSSGLVRIALE-----CKIGTRPM- 449
           G+++GH++F VQ  PR+DPV +LELA     LVKEMSSGLVRIALE         TR M 
Sbjct: 122 GHRRGHISFAVQLHPRADPVLLLELAMSTSSLVKEMSSGLVRIALESQKLSASTITRTMR 181

Query: 450 ---------KLFQEPIWTMYFNGKKFGYAMSRACGEYEWHVLSTVQTVSTGAGVIPV 593
                    KLFQEP WTMY NG+  GYA+SR CG+ +WHVLST+Q+VS GAGVIP+
Sbjct: 182 SNSGRQQQCKLFQEPSWTMYCNGRNCGYAVSRTCGDLDWHVLSTIQSVSVGAGVIPL 238


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