BLASTX nr result

ID: Coptis21_contig00032171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032171
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874219.1| hypothetical protein ARALYDRAFT_910516 [Arab...    83   2e-14
ref|NP_001190387.1| uncharacterized protein [Arabidopsis thalian...    83   3e-14
ref|NP_568451.7| uncharacterized protein [Arabidopsis thaliana] ...    83   3e-14
emb|CAC08248.1| VPS13-like protein [Arabidopsis thaliana]              83   3e-14
ref|XP_003633861.1| PREDICTED: putative vacuolar protein sorting...    82   5e-14

>ref|XP_002874219.1| hypothetical protein ARALYDRAFT_910516 [Arabidopsis lyrata subsp.
           lyrata] gi|297320056|gb|EFH50478.1| hypothetical protein
           ARALYDRAFT_910516 [Arabidopsis lyrata subsp. lyrata]
          Length = 3344

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/67 (56%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = -1

Query: 199 KFLIYHLGKFVKDIKQ-KVQLGLRKGELLIENVELLPEAFDYLQLPVSLKQGRVGRLSIT 23
           + L+ +LG+++KDIK+ ++++ L  GE+L+ENVEL+ EAF+YLQLP++LKQGRVG+LSI 
Sbjct: 11  QLLLGYLGRYIKDIKKDQLKITLWNGEVLLENVELILEAFEYLQLPIALKQGRVGKLSIK 70

Query: 22  VPWSMLG 2
           +PW  LG
Sbjct: 71  IPWKKLG 77


>ref|NP_001190387.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332005970|gb|AED93353.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 389

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/64 (59%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = -1

Query: 193 LIYHLGKFVKDI-KQKVQLGLRKGELLIENVELLPEAFDYLQLPVSLKQGRVGRLSITVP 17
           L+ +LG+++KDI K ++++ L  GE+L+ENVEL PEAF+YLQLP++LKQGRVG+LSI +P
Sbjct: 13  LLGYLGRYIKDIQKDQLKISLWNGEVLLENVELNPEAFEYLQLPIALKQGRVGKLSIKIP 72

Query: 16  WSML 5
           W  L
Sbjct: 73  WKKL 76


>ref|NP_568451.7| uncharacterized protein [Arabidopsis thaliana]
           gi|332005969|gb|AED93352.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 3464

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/64 (59%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = -1

Query: 193 LIYHLGKFVKDI-KQKVQLGLRKGELLIENVELLPEAFDYLQLPVSLKQGRVGRLSITVP 17
           L+ +LG+++KDI K ++++ L  GE+L+ENVEL PEAF+YLQLP++LKQGRVG+LSI +P
Sbjct: 13  LLGYLGRYIKDIQKDQLKISLWNGEVLLENVELNPEAFEYLQLPIALKQGRVGKLSIKIP 72

Query: 16  WSML 5
           W  L
Sbjct: 73  WKKL 76


>emb|CAC08248.1| VPS13-like protein [Arabidopsis thaliana]
          Length = 3306

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/64 (59%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
 Frame = -1

Query: 193 LIYHLGKFVKDI-KQKVQLGLRKGELLIENVELLPEAFDYLQLPVSLKQGRVGRLSITVP 17
           L+ +LG+++KDI K ++++ L  GE+L+ENVEL PEAF+YLQLP++LKQGRVG+LSI +P
Sbjct: 13  LLGYLGRYIKDIQKDQLKISLWNGEVLLENVELNPEAFEYLQLPIALKQGRVGKLSIKIP 72

Query: 16  WSML 5
           W  L
Sbjct: 73  WKKL 76


>ref|XP_003633861.1| PREDICTED: putative vacuolar protein sorting-associated protein
           13F-like [Vitis vinifera]
          Length = 355

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/69 (56%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
 Frame = -1

Query: 205 LDKFLIYHLGKFVKDI-KQKVQLGLRKGELLIENVELLPEAFDYLQLPVSLKQGRVGRLS 29
           + + L+ +LG+++KDI K+++++ L   E+L+ENVEL+ EAFDYLQLP +LKQGRVGRLS
Sbjct: 6   VSQLLLGYLGRYIKDIQKEQLKITLWNEEVLLENVELILEAFDYLQLPFALKQGRVGRLS 65

Query: 28  ITVPWSMLG 2
           I +PW  LG
Sbjct: 66  IKIPWKKLG 74


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