BLASTX nr result
ID: Coptis21_contig00032171
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00032171 (241 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002874219.1| hypothetical protein ARALYDRAFT_910516 [Arab... 83 2e-14 ref|NP_001190387.1| uncharacterized protein [Arabidopsis thalian... 83 3e-14 ref|NP_568451.7| uncharacterized protein [Arabidopsis thaliana] ... 83 3e-14 emb|CAC08248.1| VPS13-like protein [Arabidopsis thaliana] 83 3e-14 ref|XP_003633861.1| PREDICTED: putative vacuolar protein sorting... 82 5e-14 >ref|XP_002874219.1| hypothetical protein ARALYDRAFT_910516 [Arabidopsis lyrata subsp. lyrata] gi|297320056|gb|EFH50478.1| hypothetical protein ARALYDRAFT_910516 [Arabidopsis lyrata subsp. lyrata] Length = 3344 Score = 83.2 bits (204), Expect = 2e-14 Identities = 38/67 (56%), Positives = 57/67 (85%), Gaps = 1/67 (1%) Frame = -1 Query: 199 KFLIYHLGKFVKDIKQ-KVQLGLRKGELLIENVELLPEAFDYLQLPVSLKQGRVGRLSIT 23 + L+ +LG+++KDIK+ ++++ L GE+L+ENVEL+ EAF+YLQLP++LKQGRVG+LSI Sbjct: 11 QLLLGYLGRYIKDIKKDQLKITLWNGEVLLENVELILEAFEYLQLPIALKQGRVGKLSIK 70 Query: 22 VPWSMLG 2 +PW LG Sbjct: 71 IPWKKLG 77 >ref|NP_001190387.1| uncharacterized protein [Arabidopsis thaliana] gi|332005970|gb|AED93353.1| uncharacterized protein [Arabidopsis thaliana] Length = 389 Score = 82.8 bits (203), Expect = 3e-14 Identities = 38/64 (59%), Positives = 54/64 (84%), Gaps = 1/64 (1%) Frame = -1 Query: 193 LIYHLGKFVKDI-KQKVQLGLRKGELLIENVELLPEAFDYLQLPVSLKQGRVGRLSITVP 17 L+ +LG+++KDI K ++++ L GE+L+ENVEL PEAF+YLQLP++LKQGRVG+LSI +P Sbjct: 13 LLGYLGRYIKDIQKDQLKISLWNGEVLLENVELNPEAFEYLQLPIALKQGRVGKLSIKIP 72 Query: 16 WSML 5 W L Sbjct: 73 WKKL 76 >ref|NP_568451.7| uncharacterized protein [Arabidopsis thaliana] gi|332005969|gb|AED93352.1| uncharacterized protein [Arabidopsis thaliana] Length = 3464 Score = 82.8 bits (203), Expect = 3e-14 Identities = 38/64 (59%), Positives = 54/64 (84%), Gaps = 1/64 (1%) Frame = -1 Query: 193 LIYHLGKFVKDI-KQKVQLGLRKGELLIENVELLPEAFDYLQLPVSLKQGRVGRLSITVP 17 L+ +LG+++KDI K ++++ L GE+L+ENVEL PEAF+YLQLP++LKQGRVG+LSI +P Sbjct: 13 LLGYLGRYIKDIQKDQLKISLWNGEVLLENVELNPEAFEYLQLPIALKQGRVGKLSIKIP 72 Query: 16 WSML 5 W L Sbjct: 73 WKKL 76 >emb|CAC08248.1| VPS13-like protein [Arabidopsis thaliana] Length = 3306 Score = 82.8 bits (203), Expect = 3e-14 Identities = 38/64 (59%), Positives = 54/64 (84%), Gaps = 1/64 (1%) Frame = -1 Query: 193 LIYHLGKFVKDI-KQKVQLGLRKGELLIENVELLPEAFDYLQLPVSLKQGRVGRLSITVP 17 L+ +LG+++KDI K ++++ L GE+L+ENVEL PEAF+YLQLP++LKQGRVG+LSI +P Sbjct: 13 LLGYLGRYIKDIQKDQLKISLWNGEVLLENVELNPEAFEYLQLPIALKQGRVGKLSIKIP 72 Query: 16 WSML 5 W L Sbjct: 73 WKKL 76 >ref|XP_003633861.1| PREDICTED: putative vacuolar protein sorting-associated protein 13F-like [Vitis vinifera] Length = 355 Score = 82.0 bits (201), Expect = 5e-14 Identities = 39/69 (56%), Positives = 56/69 (81%), Gaps = 1/69 (1%) Frame = -1 Query: 205 LDKFLIYHLGKFVKDI-KQKVQLGLRKGELLIENVELLPEAFDYLQLPVSLKQGRVGRLS 29 + + L+ +LG+++KDI K+++++ L E+L+ENVEL+ EAFDYLQLP +LKQGRVGRLS Sbjct: 6 VSQLLLGYLGRYIKDIQKEQLKITLWNEEVLLENVELILEAFDYLQLPFALKQGRVGRLS 65 Query: 28 ITVPWSMLG 2 I +PW LG Sbjct: 66 IKIPWKKLG 74