BLASTX nr result

ID: Coptis21_contig00032159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032159
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618571.1| hypothetical protein MTR_6g013150 [Medicago ...   154   5e-36
gb|AFK44527.1| unknown [Lotus japonicus]                              154   5e-36
ref|XP_003554683.1| PREDICTED: uncharacterized protein LOC100791...   153   1e-35
emb|CBI22264.3| unnamed protein product [Vitis vinifera]              152   2e-35
ref|NP_189563.2| uncharacterized protein [Arabidopsis thaliana] ...   151   5e-35

>ref|XP_003618571.1| hypothetical protein MTR_6g013150 [Medicago truncatula]
           gi|87240627|gb|ABD32485.1| hypothetical protein
           MtrDRAFT_AC147482g2v2 [Medicago truncatula]
           gi|355493586|gb|AES74789.1| hypothetical protein
           MTR_6g013150 [Medicago truncatula]
          Length = 398

 Score =  154 bits (390), Expect = 5e-36
 Identities = 76/121 (62%), Positives = 95/121 (78%)
 Frame = +2

Query: 104 PSCHSLRIQAVHSSSSVTEEEQRRNEESTSIDTLKSFVNVNVGKWNGTFYQFDARGNLMQ 283
           PS +S++  A   SS         +E + SI+ L+SF+N+N+GKWNG+FYQFDA GNL+Q
Sbjct: 37  PSSNSIKCSA---SSFSCFSSTSLDETAMSIENLRSFINLNIGKWNGSFYQFDAGGNLLQ 93

Query: 284 EVRTKLSASSYGEEQLISLIQTLYIKQPTSNTSVSGYDSEPEWGEYKIKESNMFTVDKYQ 463
            V TKLS SSYGE++L+SLIQ+LYIKQP+SNTSVSG D + EW EYKIKE+NMFTVDKYQ
Sbjct: 94  RVSTKLSVSSYGEDELMSLIQSLYIKQPSSNTSVSGDDGDAEWAEYKIKETNMFTVDKYQ 153

Query: 464 Q 466
           Q
Sbjct: 154 Q 154


>gb|AFK44527.1| unknown [Lotus japonicus]
          Length = 389

 Score =  154 bits (390), Expect = 5e-36
 Identities = 78/121 (64%), Positives = 98/121 (80%), Gaps = 1/121 (0%)
 Frame = +2

Query: 107 SCHSLRIQAVHSSSSVTEEEQRRNEESTSIDTLKSFVNVNVGKWNGTFYQFDARGNLMQE 286
           S  + RI+A  SS+S  EE+      + SID L+ F+N+N GKWNG+FYQFD+RGN++Q+
Sbjct: 28  STQTSRIRASSSSTSTLEEDAA----AMSIDNLRRFINLNKGKWNGSFYQFDSRGNMLQQ 83

Query: 287 VRTKLSASSYGEEQLISLIQTLYIKQPTSNTSVSG-YDSEPEWGEYKIKESNMFTVDKYQ 463
           V TKLSASSYGE++L+SLIQTLYIKQP+S+TS SG  DS+ EW EYKIKE+NMFTVDKYQ
Sbjct: 84  VTTKLSASSYGEDELMSLIQTLYIKQPSSSTSTSGDDDSDDEWAEYKIKETNMFTVDKYQ 143

Query: 464 Q 466
           Q
Sbjct: 144 Q 144


>ref|XP_003554683.1| PREDICTED: uncharacterized protein LOC100791812 [Glycine max]
          Length = 406

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/115 (65%), Positives = 95/115 (82%)
 Frame = +2

Query: 122 RIQAVHSSSSVTEEEQRRNEESTSIDTLKSFVNVNVGKWNGTFYQFDARGNLMQEVRTKL 301
           RI+   SSSS T EE      + SID L+ F+N+N GKWNG+FYQFD+ GN++Q++ TKL
Sbjct: 51  RIRIRASSSSPTVEEA-----AMSIDNLRRFINLNSGKWNGSFYQFDSSGNMLQQLSTKL 105

Query: 302 SASSYGEEQLISLIQTLYIKQPTSNTSVSGYDSEPEWGEYKIKESNMFTVDKYQQ 466
           SASSYGE++L+SLIQTLYIKQP+S+TS+SG D++ EW EYKIKE+NMFTVDKYQQ
Sbjct: 106 SASSYGEDELMSLIQTLYIKQPSSSTSISGDDNDAEWAEYKIKETNMFTVDKYQQ 160


>emb|CBI22264.3| unnamed protein product [Vitis vinifera]
          Length = 889

 Score =  152 bits (385), Expect = 2e-35
 Identities = 83/160 (51%), Positives = 106/160 (66%), Gaps = 5/160 (3%)
 Frame = +2

Query: 2   STIPLTPLSKTSNSKLTHKHP--LSFLRPYQFPQLVPSCHSLRIQAVHSSSS---VTEEE 166
           S I ++P+ KT     T K P   SF  P  +   + S  S + +A   SS    V ++ 
Sbjct: 5   SPISVSPIPKTLIPTRTQKLPPTTSFRYPKPYSLSISSIRSPKTRAADFSSFSAIVGQDL 64

Query: 167 QRRNEESTSIDTLKSFVNVNVGKWNGTFYQFDARGNLMQEVRTKLSASSYGEEQLISLIQ 346
               +ES  +DTLK F+++N+G WNG+FYQFD+ GNL Q+V TKL+  SYGE++LISLIQ
Sbjct: 65  HSDADESIGLDTLKRFIDINLGCWNGSFYQFDSLGNLTQKVSTKLAVGSYGEDELISLIQ 124

Query: 347 TLYIKQPTSNTSVSGYDSEPEWGEYKIKESNMFTVDKYQQ 466
           TLYIKQP S+TS SG D EP W EYKIKE N+FTVDKYQQ
Sbjct: 125 TLYIKQPPSSTSCSGDDDEPAWAEYKIKEINLFTVDKYQQ 164


>ref|NP_189563.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332644027|gb|AEE77548.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  151 bits (382), Expect = 5e-35
 Identities = 81/155 (52%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
 Frame = +2

Query: 5   TIPLTPLSKTSNSKLTHKHPLSFLRPYQFPQLVPSCHSLRIQAVHSSSSVTEEEQRRNEE 184
           ++P TPLSK+             L+P + P ++ S +      V  S +V E+++R ++E
Sbjct: 10  SLPFTPLSKS-------------LKPIRSP-ILRSDYGTSRSFVIRSMTVQEDDKRTSDE 55

Query: 185 STSIDTLKSFVNVNVGKWNGTFYQFDARGNLMQEVRTKLSASSYGEEQLISLIQTLYIKQ 364
           S SID L+ FV++NVGKW G+F+QFD  GNL+ ++ T+LSASSYGE++L+SL Q+LYIKQ
Sbjct: 56  SMSIDNLRGFVDLNVGKWTGSFHQFDGNGNLLHKIDTRLSASSYGEDELLSLNQSLYIKQ 115

Query: 365 PTSNTSVS-GYDSEPEWGEYKIKESNMFTVDKYQQ 466
           PTS TSVS   + EPEW EYKIKE+NMFTVDKYQQ
Sbjct: 116 PTSATSVSEEEEEEPEWVEYKIKETNMFTVDKYQQ 150


Top