BLASTX nr result
ID: Coptis21_contig00032153
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00032153 (1022 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002520966.1| RNA binding protein, putative [Ricinus commu... 134 4e-29 ref|XP_002307616.1| predicted protein [Populus trichocarpa] gi|2... 124 5e-26 ref|XP_002300812.1| predicted protein [Populus trichocarpa] gi|2... 119 2e-24 ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809... 106 8e-21 dbj|BAC83034.1| hypothetical protein [Oryza sativa Japonica Grou... 105 2e-20 >ref|XP_002520966.1| RNA binding protein, putative [Ricinus communis] gi|223539803|gb|EEF41383.1| RNA binding protein, putative [Ricinus communis] Length = 383 Score = 134 bits (337), Expect = 4e-29 Identities = 78/162 (48%), Positives = 108/162 (66%), Gaps = 1/162 (0%) Frame = +2 Query: 245 KQVGRVSSEEANVGKSCRVGYSERDAERKKTSHYSMRRSPMPALITEESYGCSVASCSSN 424 +QV +SS++A + + G E DA K + + SP +L TEES CSVASCSSN Sbjct: 223 RQVDDISSQKARADEKFKEGIIEMDAYTAKRATDWLCNSPK-SLSTEESDQCSVASCSSN 281 Query: 425 DFPEYTVQIARKSYKDFTDSSFDDAESF-CPSVSWRDNISSEDELEANVRELELRAYRMT 601 +F ++ K+ + +D+S ++ SF C SV+ E +LEAN+ ELE +AY+ T Sbjct: 282 NFCDFPSHNCCKALEAISDNSDAESSSFPCSSVNISSTPYFEQKLEANIHELEFQAYKST 341 Query: 602 LQALYASGPLSWAQESVLTNLRLSLRISNEEHLLQLRQLLAS 727 ++ALYASGPLSW QES+LTNLRLSL IS+EEHLLQL+ LL++ Sbjct: 342 VRALYASGPLSWEQESLLTNLRLSLHISDEEHLLQLKHLLST 383 >ref|XP_002307616.1| predicted protein [Populus trichocarpa] gi|222857065|gb|EEE94612.1| predicted protein [Populus trichocarpa] Length = 379 Score = 124 bits (310), Expect = 5e-26 Identities = 99/258 (38%), Positives = 139/258 (53%), Gaps = 15/258 (5%) Frame = +2 Query: 2 WTVIGKVAAGDKNIGNKIVHNNSKYHIDL-GSDIPPGIQEVIYSREKEGQEELSTF-HHL 175 W+VIGKV ++ K N SK+ L + P ++ EK+GQ+ L H++ Sbjct: 128 WSVIGKVTQNIEH-SKKCAENKSKHSGSLVRRALVPVTRKDPCLLEKDGQKHLKDGQHNV 186 Query: 176 RTLKRKHSLRFDDATMES---GTKKR--------KQVGRVSSEEANVGKSCRVGYSERDA 322 + +H L + S G K+ K+ +SSE+ + + G SE +A Sbjct: 187 KMGLDQHHLERSSKDLVSCMEGCHKQLVRNLPFFKRADNISSEKLIADEKFK-GSSEMNA 245 Query: 323 ERKKTSHYSMRRSPMPALITEESYGCSVASCSSNDFPEYTVQIARKSYKDFTDSSFDDAE 502 K + Y+ R L+T +S SVASCSSN F + + + + + S DAE Sbjct: 246 NMVKATTYTSSRP----LLTADSNQSSVASCSSNGFADSSSHNFQTPLDNASHRS--DAE 299 Query: 503 SFCPSVSWRDNISS--EDELEANVRELELRAYRMTLQALYASGPLSWAQESVLTNLRLSL 676 S S S+ ++ E +LEA + ELE AYR T+QALYASGPLSW QES+LTNLRLSL Sbjct: 300 SSFVSFSFIKRLTPYFEQKLEAEIHELEFHAYRSTVQALYASGPLSWEQESLLTNLRLSL 359 Query: 677 RISNEEHLLQLRQLLASQ 730 IS+EEHLL LRQLL++Q Sbjct: 360 HISDEEHLLHLRQLLSTQ 377 >ref|XP_002300812.1| predicted protein [Populus trichocarpa] gi|222842538|gb|EEE80085.1| predicted protein [Populus trichocarpa] Length = 394 Score = 119 bits (297), Expect = 2e-24 Identities = 93/256 (36%), Positives = 132/256 (51%), Gaps = 13/256 (5%) Frame = +2 Query: 2 WTVIGKVAAGDKNIGNKIVHNNSKYHIDLGSDIPP-GIQEVIYSREKEGQEELSTFHH-- 172 W+VIGKVA +K N K+ L P +++ REK+GQ+ L H+ Sbjct: 128 WSVIGKVAH-NKEYTKNCTENKPKHSGSLMRRAPVLVVRKDPCLREKDGQKHLKDGHNNI 186 Query: 173 LRTLKRKHSLRFDDATMESGTKKRKQVGR----------VSSEEANVGKSCRVGYSERDA 322 + L +H R + KQ+ R +S+E+ V + + G SE +A Sbjct: 187 KKGLDHQHLERSSKDLISCVGGCHKQLARNLPLFKREDSISAEKLRVDEKFK-GSSEMNA 245 Query: 323 ERKKTSHYSMRRSPMPALITEESYGCSVASCSSNDFPEYTVQIARKSYKDFTDSSFDDAE 502 + K + + SP P L + + SVASC SN + + +K + + +S ++ Sbjct: 246 KVVKATTEWLFTSPRPRLTEDSNLISSVASCRSNGSVDSSSHKFQKPLDNTSHNSDAESS 305 Query: 503 SFCPSVSWRDNISSEDELEANVRELELRAYRMTLQALYASGPLSWAQESVLTNLRLSLRI 682 SV R E + A + ELE AYR T+QALYASGPLSW QES+LTNLRLSL I Sbjct: 306 FLSFSVIKRLTPCFEQKQGAEIHELEFHAYRSTVQALYASGPLSWEQESLLTNLRLSLNI 365 Query: 683 SNEEHLLQLRQLLASQ 730 S+EEHLL LRQLL++Q Sbjct: 366 SDEEHLLHLRQLLSTQ 381 >ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809539 [Glycine max] Length = 397 Score = 106 bits (265), Expect = 8e-21 Identities = 73/194 (37%), Positives = 103/194 (53%), Gaps = 12/194 (6%) Frame = +2 Query: 188 RKHSLRFDDATMESGTKKRKQVGRVSSEEANVGKSC--------RVGYSER-DAERKKTS 340 R++ R A + + KQV VS + + C + G S D ER+K + Sbjct: 205 RENEGRCHRARLRNPPTPLKQVQGVSFPREVIAEECIPASVNNRKTGISNMVDMERRKQT 264 Query: 341 HYSMRRSPMPALITEESYGCSVASCSSNDFPEYTVQIARKSYK-DFTDSSFDDAESFCPS 517 ++ + S CSV SCS Y Q + D DSSF DAES C Sbjct: 265 GENLESNHA------YSVTCSVGSCSITSRNSYKSQFPVYAGPFDDVDSSFSDAESVCQR 318 Query: 518 VSWRDNIS--SEDELEANVRELELRAYRMTLQALYASGPLSWAQESVLTNLRLSLRISNE 691 N S +++EL A + LEL AY T++AL+ASGPLSW QE+++TNLRLSL ISN+ Sbjct: 319 SDEEGNCSPPTQEELAAEIHRLELHAYHCTIEALHASGPLSWEQEALMTNLRLSLHISND 378 Query: 692 EHLLQLRQLLASQD 733 EHL++LR L++S++ Sbjct: 379 EHLMELRNLISSEN 392 >dbj|BAC83034.1| hypothetical protein [Oryza sativa Japonica Group] gi|125599323|gb|EAZ38899.1| hypothetical protein OsJ_23318 [Oryza sativa Japonica Group] Length = 362 Score = 105 bits (261), Expect = 2e-20 Identities = 66/125 (52%), Positives = 86/125 (68%), Gaps = 2/125 (1%) Frame = +2 Query: 359 SPMPALITEESYGCSVASCSSNDFPEYTVQIARKSYKDFTDSSFDDAESFCPSVSWR--D 532 S MP + EE+ CSVASCS N F E+++ +S +S DDA S CPS+ + D Sbjct: 242 SQMPLQVREENE-CSVASCSVN-FSEHSMNTDTQSV-GVRNSFPDDAMSSCPSMLRQESD 298 Query: 533 NISSEDELEANVRELELRAYRMTLQALYASGPLSWAQESVLTNLRLSLRISNEEHLLQLR 712 N+ D + +V ELEL+AY+ T++A YA GPL+W QES+LTNLRLSL I+NEEHLLQLR Sbjct: 299 NVHGCD-FKMDVHELELQAYQSTVRAFYALGPLTWEQESLLTNLRLSLNITNEEHLLQLR 357 Query: 713 QLLAS 727 LL+S Sbjct: 358 HLLSS 362