BLASTX nr result

ID: Coptis21_contig00032153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032153
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520966.1| RNA binding protein, putative [Ricinus commu...   134   4e-29
ref|XP_002307616.1| predicted protein [Populus trichocarpa] gi|2...   124   5e-26
ref|XP_002300812.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-24
ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809...   106   8e-21
dbj|BAC83034.1| hypothetical protein [Oryza sativa Japonica Grou...   105   2e-20

>ref|XP_002520966.1| RNA binding protein, putative [Ricinus communis]
           gi|223539803|gb|EEF41383.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score =  134 bits (337), Expect = 4e-29
 Identities = 78/162 (48%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
 Frame = +2

Query: 245 KQVGRVSSEEANVGKSCRVGYSERDAERKKTSHYSMRRSPMPALITEESYGCSVASCSSN 424
           +QV  +SS++A   +  + G  E DA   K +   +  SP  +L TEES  CSVASCSSN
Sbjct: 223 RQVDDISSQKARADEKFKEGIIEMDAYTAKRATDWLCNSPK-SLSTEESDQCSVASCSSN 281

Query: 425 DFPEYTVQIARKSYKDFTDSSFDDAESF-CPSVSWRDNISSEDELEANVRELELRAYRMT 601
           +F ++      K+ +  +D+S  ++ SF C SV+       E +LEAN+ ELE +AY+ T
Sbjct: 282 NFCDFPSHNCCKALEAISDNSDAESSSFPCSSVNISSTPYFEQKLEANIHELEFQAYKST 341

Query: 602 LQALYASGPLSWAQESVLTNLRLSLRISNEEHLLQLRQLLAS 727
           ++ALYASGPLSW QES+LTNLRLSL IS+EEHLLQL+ LL++
Sbjct: 342 VRALYASGPLSWEQESLLTNLRLSLHISDEEHLLQLKHLLST 383


>ref|XP_002307616.1| predicted protein [Populus trichocarpa] gi|222857065|gb|EEE94612.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  124 bits (310), Expect = 5e-26
 Identities = 99/258 (38%), Positives = 139/258 (53%), Gaps = 15/258 (5%)
 Frame = +2

Query: 2   WTVIGKVAAGDKNIGNKIVHNNSKYHIDL-GSDIPPGIQEVIYSREKEGQEELSTF-HHL 175
           W+VIGKV    ++   K   N SK+   L    + P  ++     EK+GQ+ L    H++
Sbjct: 128 WSVIGKVTQNIEH-SKKCAENKSKHSGSLVRRALVPVTRKDPCLLEKDGQKHLKDGQHNV 186

Query: 176 RTLKRKHSLRFDDATMES---GTKKR--------KQVGRVSSEEANVGKSCRVGYSERDA 322
           +    +H L      + S   G  K+        K+   +SSE+    +  + G SE +A
Sbjct: 187 KMGLDQHHLERSSKDLVSCMEGCHKQLVRNLPFFKRADNISSEKLIADEKFK-GSSEMNA 245

Query: 323 ERKKTSHYSMRRSPMPALITEESYGCSVASCSSNDFPEYTVQIARKSYKDFTDSSFDDAE 502
              K + Y+  R     L+T +S   SVASCSSN F + +    +    + +  S  DAE
Sbjct: 246 NMVKATTYTSSRP----LLTADSNQSSVASCSSNGFADSSSHNFQTPLDNASHRS--DAE 299

Query: 503 SFCPSVSWRDNISS--EDELEANVRELELRAYRMTLQALYASGPLSWAQESVLTNLRLSL 676
           S   S S+   ++   E +LEA + ELE  AYR T+QALYASGPLSW QES+LTNLRLSL
Sbjct: 300 SSFVSFSFIKRLTPYFEQKLEAEIHELEFHAYRSTVQALYASGPLSWEQESLLTNLRLSL 359

Query: 677 RISNEEHLLQLRQLLASQ 730
            IS+EEHLL LRQLL++Q
Sbjct: 360 HISDEEHLLHLRQLLSTQ 377


>ref|XP_002300812.1| predicted protein [Populus trichocarpa] gi|222842538|gb|EEE80085.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  119 bits (297), Expect = 2e-24
 Identities = 93/256 (36%), Positives = 132/256 (51%), Gaps = 13/256 (5%)
 Frame = +2

Query: 2   WTVIGKVAAGDKNIGNKIVHNNSKYHIDLGSDIPP-GIQEVIYSREKEGQEELSTFHH-- 172
           W+VIGKVA  +K        N  K+   L    P   +++    REK+GQ+ L   H+  
Sbjct: 128 WSVIGKVAH-NKEYTKNCTENKPKHSGSLMRRAPVLVVRKDPCLREKDGQKHLKDGHNNI 186

Query: 173 LRTLKRKHSLRFDDATMESGTKKRKQVGR----------VSSEEANVGKSCRVGYSERDA 322
            + L  +H  R     +       KQ+ R          +S+E+  V +  + G SE +A
Sbjct: 187 KKGLDHQHLERSSKDLISCVGGCHKQLARNLPLFKREDSISAEKLRVDEKFK-GSSEMNA 245

Query: 323 ERKKTSHYSMRRSPMPALITEESYGCSVASCSSNDFPEYTVQIARKSYKDFTDSSFDDAE 502
           +  K +   +  SP P L  + +   SVASC SN   + +    +K   + + +S  ++ 
Sbjct: 246 KVVKATTEWLFTSPRPRLTEDSNLISSVASCRSNGSVDSSSHKFQKPLDNTSHNSDAESS 305

Query: 503 SFCPSVSWRDNISSEDELEANVRELELRAYRMTLQALYASGPLSWAQESVLTNLRLSLRI 682
               SV  R     E +  A + ELE  AYR T+QALYASGPLSW QES+LTNLRLSL I
Sbjct: 306 FLSFSVIKRLTPCFEQKQGAEIHELEFHAYRSTVQALYASGPLSWEQESLLTNLRLSLNI 365

Query: 683 SNEEHLLQLRQLLASQ 730
           S+EEHLL LRQLL++Q
Sbjct: 366 SDEEHLLHLRQLLSTQ 381


>ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809539 [Glycine max]
          Length = 397

 Score =  106 bits (265), Expect = 8e-21
 Identities = 73/194 (37%), Positives = 103/194 (53%), Gaps = 12/194 (6%)
 Frame = +2

Query: 188 RKHSLRFDDATMESGTKKRKQVGRVSSEEANVGKSC--------RVGYSER-DAERKKTS 340
           R++  R   A + +     KQV  VS     + + C        + G S   D ER+K +
Sbjct: 205 RENEGRCHRARLRNPPTPLKQVQGVSFPREVIAEECIPASVNNRKTGISNMVDMERRKQT 264

Query: 341 HYSMRRSPMPALITEESYGCSVASCSSNDFPEYTVQIARKSYK-DFTDSSFDDAESFCPS 517
             ++  +         S  CSV SCS      Y  Q    +   D  DSSF DAES C  
Sbjct: 265 GENLESNHA------YSVTCSVGSCSITSRNSYKSQFPVYAGPFDDVDSSFSDAESVCQR 318

Query: 518 VSWRDNIS--SEDELEANVRELELRAYRMTLQALYASGPLSWAQESVLTNLRLSLRISNE 691
                N S  +++EL A +  LEL AY  T++AL+ASGPLSW QE+++TNLRLSL ISN+
Sbjct: 319 SDEEGNCSPPTQEELAAEIHRLELHAYHCTIEALHASGPLSWEQEALMTNLRLSLHISND 378

Query: 692 EHLLQLRQLLASQD 733
           EHL++LR L++S++
Sbjct: 379 EHLMELRNLISSEN 392


>dbj|BAC83034.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|125599323|gb|EAZ38899.1| hypothetical protein
           OsJ_23318 [Oryza sativa Japonica Group]
          Length = 362

 Score =  105 bits (261), Expect = 2e-20
 Identities = 66/125 (52%), Positives = 86/125 (68%), Gaps = 2/125 (1%)
 Frame = +2

Query: 359 SPMPALITEESYGCSVASCSSNDFPEYTVQIARKSYKDFTDSSFDDAESFCPSVSWR--D 532
           S MP  + EE+  CSVASCS N F E+++    +S     +S  DDA S CPS+  +  D
Sbjct: 242 SQMPLQVREENE-CSVASCSVN-FSEHSMNTDTQSV-GVRNSFPDDAMSSCPSMLRQESD 298

Query: 533 NISSEDELEANVRELELRAYRMTLQALYASGPLSWAQESVLTNLRLSLRISNEEHLLQLR 712
           N+   D  + +V ELEL+AY+ T++A YA GPL+W QES+LTNLRLSL I+NEEHLLQLR
Sbjct: 299 NVHGCD-FKMDVHELELQAYQSTVRAFYALGPLTWEQESLLTNLRLSLNITNEEHLLQLR 357

Query: 713 QLLAS 727
            LL+S
Sbjct: 358 HLLSS 362


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