BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032129
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   100   2e-19
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           100   2e-19
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   100   2e-19
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 98   8e-19

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/136 (36%), Positives = 78/136 (57%), Gaps = 3/136 (2%)
 Frame = -3

Query: 444 EYLALTKKEGGLGIMNLGQWNKAGYCGLIFKIVS-KEKSLWVSWAWNHHIKNKSFWTMPC 268
           + + L KKEGGLGI ++ +WNK      I+ + +  + S+W +W  ++ ++ ++FWT+  
Sbjct: 150 DQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKT 209

Query: 267 PRECSWVWRNILELRTTACKFIKYSIASGNETSLWYDLWCSTRPLIEDQNARNYIQPPL- 91
           P+ CSW W  IL+LR+ A   +KY I  G  TSLW+D W    PL +    R      + 
Sbjct: 210 PQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMA 269

Query: 90  -EAKVSELISSAEWNS 46
             AKV+ LI ++EW +
Sbjct: 270 KNAKVNVLIQNSEWKT 285


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  100 bits (248), Expect = 2e-19
 Identities = 52/129 (40%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
 Frame = -3

Query: 438  LALTKKEGGLGIMNLGQWNKAGYCGLIFKIVSKEKSLWVSWAWNHHIKNKSFWTMPCPRE 259
            L   K+EGGLGI +L + NK     LI+++VS++ SLWV+W W + I+  SFW+      
Sbjct: 1007 LCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSS 1066

Query: 258  C-SWVWRNILELRTTACKFIKYSIASGNETSLWYDLWCSTRPLIEDQNARNYIQP--PLE 88
              SW+W+ +L  R  A    K  I SG+ TS WYD W   R L++  NAR  I    PL 
Sbjct: 1067 LGSWMWKKLLNYRDVAKSMCKVEIKSGSSTSFWYDNWSQLRQLVDVTNARRTIDMGIPLA 1126

Query: 87   AKVSELISS 61
            A V+ +++S
Sbjct: 1127 ATVATVLAS 1135


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
 Frame = -3

Query: 486  SNNIVERKMHHASNEYLALTKKEGGLGIMNLGQWNKAGYCGLIFKIVSKEKSLWVSWAWN 307
            + +I  RK    S     L K EGGLG  + G+WNK     LI+ +  ++ SLW  W  +
Sbjct: 702  AGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRH 761

Query: 306  HHIKNKSFWTMPCPRECSWVWRNILELRTTACKFIKYSIASGNETSLWYDLWCSTRPLIE 127
            H + + SFW +   +   W W+ +L LR  A KFIK  + +G   S W+D W S  PLI+
Sbjct: 762  HRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWTSLGPLIK 821

Query: 126  ---DQNARNYIQPPLEAKVSELISSAEW 52
               D  +R  ++ P  AKV++ I  + W
Sbjct: 822  YLGDVGSRP-LRIPFSAKVADAIDGSGW 848


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
 Frame = -3

Query: 486  SNNIVERKMHHASNEYLALTKKEGGLGIMNLGQWNKAGYCGLIFKIVSKEKSLWVSWAWN 307
            + +I  RK    S     L K EGGLG  + G+WNK     LI+ +  ++ SLW  W  +
Sbjct: 702  AGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRH 761

Query: 306  HHIKNKSFWTMPCPRECSWVWRNILELRTTACKFIKYSIASGNETSLWYDLWCSTRPLIE 127
            H + + SFW +   +   W W+ +L LR  A KFIK  + +G   S W+D W S  PLI+
Sbjct: 762  HRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWTSLGPLIK 821

Query: 126  ---DQNARNYIQPPLEAKVSELISSAEW 52
               D  +R  ++ P  AKV++ I  + W
Sbjct: 822  YLGDVGSRP-LRIPFSAKVADAIDGSGW 848


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
 Frame = -3

Query: 438 LALTKKEGGLGIMNLGQWNKAGYCGLIFKIVSKEKSLWVSWAWNHHIKNKSFWTMPCPRE 259
           L   K+EGGLGI +L + NK     LI+++VS++ SLWV+W W + I+  SFW+      
Sbjct: 438 LCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSS 497

Query: 258 C-SWVWRNILELRTTACKFIKYSIASGNETSLWYDLWCSTRPLIEDQNARNYIQP--PLE 88
             SW+W+ +L+ R  A    K  I SG+ TS WYD W     L++  NAR  I    PL 
Sbjct: 498 LGSWMWKKLLKYRDVAKSMCKVEIKSGSSTSFWYDNWSQLGQLVDVTNARRTIDMGIPLA 557

Query: 87  AKVSELISS 61
           A V+ +++S
Sbjct: 558 ATVATVLAS 566