BLASTX nr result

ID: Coptis21_contig00032122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032122
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528311.1| clathrin heavy chain, putative [Ricinus comm...   185   4e-45
ref|XP_002316201.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-45
ref|XP_002311238.1| predicted protein [Populus trichocarpa] gi|2...   184   9e-45
ref|XP_002269905.1| PREDICTED: clathrin heavy chain 1 [Vitis vin...   182   2e-44
ref|XP_003544075.1| PREDICTED: clathrin heavy chain 1-like [Glyc...   180   9e-44

>ref|XP_002528311.1| clathrin heavy chain, putative [Ricinus communis]
           gi|223532266|gb|EEF34069.1| clathrin heavy chain,
           putative [Ricinus communis]
          Length = 1705

 Score =  185 bits (469), Expect = 4e-45
 Identities = 93/127 (73%), Positives = 108/127 (85%), Gaps = 3/127 (2%)
 Frame = +3

Query: 51  MATSNAPITVKEVLKLPSIGINPLSINFTDVKMESDKYICVRERA---SVVIIDMNMPNQ 221
           MA +NAPIT+KEVL LP+IGI+P  I FT+V MESDKYICVRE A   SVVIIDMNMP Q
Sbjct: 1   MAAANAPITMKEVLTLPTIGISPQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ 60

Query: 222 PLRMSIIADSAMMNPNSRILAFKNQLPGTTCDYLKIFDIEMDTEMRSHQMPKQIVFWQWI 401
           PLR  I ADSA+MNPNSRILA K QLPGTT D+L+IF+IEM  +M+SHQMP+Q+VFW+WI
Sbjct: 61  PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVVFWKWI 120

Query: 402 TPKMLGL 422
           +PKMLGL
Sbjct: 121 SPKMLGL 127


>ref|XP_002316201.1| predicted protein [Populus trichocarpa] gi|222865241|gb|EEF02372.1|
           predicted protein [Populus trichocarpa]
          Length = 1705

 Score =  184 bits (468), Expect = 5e-45
 Identities = 94/127 (74%), Positives = 108/127 (85%), Gaps = 3/127 (2%)
 Frame = +3

Query: 51  MATSNAPITVKEVLKLPSIGINPLSINFTDVKMESDKYICVRERA---SVVIIDMNMPNQ 221
           MA +NAPIT+KEVL LP+IGI+P  I FT+V MESDKYICVRE A   SVVIIDMNMP Q
Sbjct: 1   MAAANAPITMKEVLTLPAIGISPQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ 60

Query: 222 PLRMSIIADSAMMNPNSRILAFKNQLPGTTCDYLKIFDIEMDTEMRSHQMPKQIVFWQWI 401
           PLR  I ADSA+MNPNSRILA K QLPGTT D+L+IF+IEM  +M+S+QMP+QIVFW+WI
Sbjct: 61  PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSYQMPEQIVFWKWI 120

Query: 402 TPKMLGL 422
           TPKMLGL
Sbjct: 121 TPKMLGL 127


>ref|XP_002311238.1| predicted protein [Populus trichocarpa] gi|222851058|gb|EEE88605.1|
           predicted protein [Populus trichocarpa]
          Length = 1700

 Score =  184 bits (466), Expect = 9e-45
 Identities = 94/127 (74%), Positives = 108/127 (85%), Gaps = 3/127 (2%)
 Frame = +3

Query: 51  MATSNAPITVKEVLKLPSIGINPLSINFTDVKMESDKYICVRERA---SVVIIDMNMPNQ 221
           MA +NAPIT+KEVL LPSIGI+P  I FT+V MESDKYICVRE A   SVVIIDM+MP Q
Sbjct: 1   MAAANAPITMKEVLTLPSIGISPQFITFTNVTMESDKYICVRETAPQNSVVIIDMHMPMQ 60

Query: 222 PLRMSIIADSAMMNPNSRILAFKNQLPGTTCDYLKIFDIEMDTEMRSHQMPKQIVFWQWI 401
           PLR  I ADSA+MNPNSRILA K QLPGTT D+L+IF+IEM  +M+S+QMP+QIVFW+WI
Sbjct: 61  PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSYQMPEQIVFWKWI 120

Query: 402 TPKMLGL 422
           TPKMLGL
Sbjct: 121 TPKMLGL 127


>ref|XP_002269905.1| PREDICTED: clathrin heavy chain 1 [Vitis vinifera]
           gi|147866332|emb|CAN79917.1| hypothetical protein
           VITISV_005429 [Vitis vinifera]
           gi|297736586|emb|CBI25457.3| unnamed protein product
           [Vitis vinifera]
          Length = 1704

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/127 (72%), Positives = 107/127 (84%), Gaps = 3/127 (2%)
 Frame = +3

Query: 51  MATSNAPITVKEVLKLPSIGINPLSINFTDVKMESDKYICVRERA---SVVIIDMNMPNQ 221
           MA +NAPIT+KEVL LPS+GI+P  I FT V MESDKY+CVRE A   SVVIIDMNMP Q
Sbjct: 1   MAAANAPITMKEVLTLPSLGISPQFITFTHVTMESDKYLCVRETAPQNSVVIIDMNMPMQ 60

Query: 222 PLRMSIIADSAMMNPNSRILAFKNQLPGTTCDYLKIFDIEMDTEMRSHQMPKQIVFWQWI 401
           PLR  I ADSA+MNPN+RILA K QLPGTT D+L+IF+IEM  +M+S+QMP+QIVFW+WI
Sbjct: 61  PLRRPITADSALMNPNTRILALKAQLPGTTQDHLQIFNIEMKAKMKSYQMPEQIVFWKWI 120

Query: 402 TPKMLGL 422
           TPKMLGL
Sbjct: 121 TPKMLGL 127


>ref|XP_003544075.1| PREDICTED: clathrin heavy chain 1-like [Glycine max]
          Length = 1700

 Score =  180 bits (457), Expect = 9e-44
 Identities = 92/127 (72%), Positives = 105/127 (82%), Gaps = 3/127 (2%)
 Frame = +3

Query: 51  MATSNAPITVKEVLKLPSIGINPLSINFTDVKMESDKYICVRERA---SVVIIDMNMPNQ 221
           MA +NAPIT+KE L LPSIGIN   I FT V MESDKYICVRE A   SVVIIDMNMPNQ
Sbjct: 1   MAAANAPITMKEALTLPSIGINSQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPNQ 60

Query: 222 PLRMSIIADSAMMNPNSRILAFKNQLPGTTCDYLKIFDIEMDTEMRSHQMPKQIVFWQWI 401
           PLR  I ADSA+MNPNSRILA K QL GTT D+L+IF+IEM  +M+S+QMP+Q+VFW+WI
Sbjct: 61  PLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWI 120

Query: 402 TPKMLGL 422
           +PKMLGL
Sbjct: 121 SPKMLGL 127


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