BLASTX nr result

ID: Coptis21_contig00032116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032116
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138865.1| PREDICTED: UPF0481 protein At3g47200-like [C...    72   5e-11
ref|XP_004169888.1| PREDICTED: UPF0481 protein At3g47200-like [C...    70   1e-10
ref|XP_002269911.2| PREDICTED: UPF0481 protein At3g47200-like [V...    70   2e-10
emb|CBI39827.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002509542.1| conserved hypothetical protein [Ricinus comm...    69   3e-10

>ref|XP_004138865.1| PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus]
          Length = 512

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = +2

Query: 17  DLKNAGVVFKKKENAESMLNITFEDGNLIIPPFFFGECMIVYLQNLIALEH-SGSNYTSH 193
           +L  +GV  KK +N ES++NITF +G L IPP    +   +  +NL+A E     N   +
Sbjct: 336 ELNESGVTVKKAKNVESLMNITFTNGVLEIPPLNICDEFELLFRNLVAFEQFQAGNGKMY 395

Query: 194 ITSYVIFLDTLINSKEDVKLLRSEGII 274
            T Y+IF+D LIN+K+DV+LL + G+I
Sbjct: 396 ATQYIIFMDNLINTKKDVRLLVNSGVI 422


>ref|XP_004169888.1| PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus]
          Length = 447

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = +2

Query: 17  DLKNAGVVFKKKENAESMLNITFEDGNLIIPPFFFGECMIVYLQNLIALEH-SGSNYTSH 193
           +L  +GV  KK +N +S++NITF +G L IPP    +   +  +NL+A E     N   +
Sbjct: 271 ELNESGVTIKKAKNVKSLMNITFTNGVLEIPPLNICDEFELLFRNLVAFEQFQAGNGKMY 330

Query: 194 ITSYVIFLDTLINSKEDVKLLRSEGII 274
            T Y++F+D LIN+K+DV+LL + G+I
Sbjct: 331 ATQYIVFMDNLINTKKDVRLLVNSGVI 357


>ref|XP_002269911.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 498

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/91 (38%), Positives = 55/91 (60%)
 Frame = +2

Query: 5   YCAADLKNAGVVFKKKENAESMLNITFEDGNLIIPPFFFGECMIVYLQNLIALEHSGSNY 184
           +C  +L+ AGV FK +E+ + +L+I+F+DG L IPP +  +  +    NL+A E    + 
Sbjct: 314 HCVTELQEAGVRFKMREDLD-LLDISFKDGMLKIPPLYIDDNTVPLFLNLVAYEQCDQDA 372

Query: 185 TSHITSYVIFLDTLINSKEDVKLLRSEGIIN 277
               T++ +F D+LINS  DV +L   GIIN
Sbjct: 373 KPFFTNFCMFFDSLINSHTDVGILHKNGIIN 403


>emb|CBI39827.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/91 (38%), Positives = 55/91 (60%)
 Frame = +2

Query: 5   YCAADLKNAGVVFKKKENAESMLNITFEDGNLIIPPFFFGECMIVYLQNLIALEHSGSNY 184
           +C  +L+ AGV FK +E+ + +L+I+F+DG L IPP +  +  +    NL+A E    + 
Sbjct: 298 HCVTELQEAGVRFKMREDLD-LLDISFKDGMLKIPPLYIDDNTVPLFLNLVAYEQCDQDA 356

Query: 185 TSHITSYVIFLDTLINSKEDVKLLRSEGIIN 277
               T++ +F D+LINS  DV +L   GIIN
Sbjct: 357 KPFFTNFCMFFDSLINSHTDVGILHKNGIIN 387


>ref|XP_002509542.1| conserved hypothetical protein [Ricinus communis]
           gi|223549441|gb|EEF50929.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/89 (40%), Positives = 53/89 (59%)
 Frame = +2

Query: 11  AADLKNAGVVFKKKENAESMLNITFEDGNLIIPPFFFGECMIVYLQNLIALEHSGSNYTS 190
           A ++K +G++FKK E+A+S+L+I F+ G L IP     E      +NLI+ E     Y  
Sbjct: 262 ATEIKESGILFKKHEDAKSILDIRFDKGILEIPNLLIQETTETIFRNLISFEQCSREYPP 321

Query: 191 HITSYVIFLDTLINSKEDVKLLRSEGIIN 277
            +T Y I LD LIN+ +DV +L S  II+
Sbjct: 322 IVTCYAILLDNLINTVKDVNILCSSDIID 350