BLASTX nr result

ID: Coptis21_contig00032099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032099
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-56
ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [...   218   4e-55
emb|CBI23232.3| unnamed protein product [Vitis vinifera]              218   4e-55
ref|XP_004158004.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA ...   214   6e-54
ref|XP_004153226.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...   214   6e-54

>ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|222832812|gb|EEE71289.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  223 bits (569), Expect = 1e-56
 Identities = 104/145 (71%), Positives = 116/145 (80%)
 Frame = -3

Query: 466 CPGPPTWDQMFSKERVDQAKEALTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAK 287
           CP PP WDQMFSKERVDQAKEA+  L  ++NV+FCGDMNWDDKLDG  PFPDGWVDAW +
Sbjct: 275 CPAPPKWDQMFSKERVDQAKEAINLLKKNSNVIFCGDMNWDDKLDGQFPFPDGWVDAWVE 334

Query: 286 LRPREDGYTYDTKSNQMLSANRKLQKRLDRFLCSLQDYKISGIDMIGTEAIPGLSYCXXX 107
           L+P ++G+TYDTKSNQMLS NR LQKRLDRF+CSL D+KIS IDMIG +AIPGLSY    
Sbjct: 335 LKPGDNGWTYDTKSNQMLSGNRALQKRLDRFICSLCDFKISKIDMIGKDAIPGLSYMKEK 394

Query: 106 XXXXXXXXLMLPVYPSDHYGLLLTI 32
                   L LPV PSDHYGLLLTI
Sbjct: 395 KVRKEVKMLELPVLPSDHYGLLLTI 419


>ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Vitis vinifera]
          Length = 447

 Score =  218 bits (555), Expect = 4e-55
 Identities = 103/145 (71%), Positives = 112/145 (77%)
 Frame = -3

Query: 466 CPGPPTWDQMFSKERVDQAKEALTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAK 287
           CP PP WDQM+SKERVDQAKEAL  L  + NV+F GDMNWD+K DG  P PDGWVDAWA 
Sbjct: 300 CPAPPKWDQMYSKERVDQAKEALNLLTKNPNVIFGGDMNWDEKSDGQFPLPDGWVDAWAD 359

Query: 286 LRPREDGYTYDTKSNQMLSANRKLQKRLDRFLCSLQDYKISGIDMIGTEAIPGLSYCXXX 107
           LRP E+G+TYDTKSNQMLS NR LQKRLDRF+C L D+KIS IDMIG E IPGLSYC   
Sbjct: 360 LRPGENGWTYDTKSNQMLSGNRTLQKRLDRFMCRLHDFKISKIDMIGMEPIPGLSYCKEK 419

Query: 106 XXXXXXXXLMLPVYPSDHYGLLLTI 32
                   L+LPV PSDHYGLLLTI
Sbjct: 420 KVRKEMQQLVLPVLPSDHYGLLLTI 444


>emb|CBI23232.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score =  218 bits (555), Expect = 4e-55
 Identities = 103/145 (71%), Positives = 112/145 (77%)
 Frame = -3

Query: 466  CPGPPTWDQMFSKERVDQAKEALTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAK 287
            CP PP WDQM+SKERVDQAKEAL  L  + NV+F GDMNWD+K DG  P PDGWVDAWA 
Sbjct: 814  CPAPPKWDQMYSKERVDQAKEALNLLTKNPNVIFGGDMNWDEKSDGQFPLPDGWVDAWAD 873

Query: 286  LRPREDGYTYDTKSNQMLSANRKLQKRLDRFLCSLQDYKISGIDMIGTEAIPGLSYCXXX 107
            LRP E+G+TYDTKSNQMLS NR LQKRLDRF+C L D+KIS IDMIG E IPGLSYC   
Sbjct: 874  LRPGENGWTYDTKSNQMLSGNRTLQKRLDRFMCRLHDFKISKIDMIGMEPIPGLSYCKEK 933

Query: 106  XXXXXXXXLMLPVYPSDHYGLLLTI 32
                    L+LPV PSDHYGLLLTI
Sbjct: 934  KVRKEMQQLVLPVLPSDHYGLLLTI 958


>ref|XP_004158004.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA phosphodiesterase
           2-like [Cucumis sativus]
          Length = 463

 Score =  214 bits (545), Expect = 6e-54
 Identities = 98/145 (67%), Positives = 116/145 (80%)
 Frame = -3

Query: 466 CPGPPTWDQMFSKERVDQAKEALTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAK 287
           CP PPTW+QMFSKERV QAK+++ FL  + NV+F GDMNWDDKLDG  PFPDGW+DAW +
Sbjct: 316 CPAPPTWNQMFSKERVVQAKQSVGFLKETPNVIFGGDMNWDDKLDGRFPFPDGWIDAWEE 375

Query: 286 LRPREDGYTYDTKSNQMLSANRKLQKRLDRFLCSLQDYKISGIDMIGTEAIPGLSYCXXX 107
           LRP E+G+TYDTKSN+MLS NR LQKRLDRF+C LQD+K++ I+MIGT++IPGLSY    
Sbjct: 376 LRPGENGWTYDTKSNKMLSGNRTLQKRLDRFICKLQDFKVNSIEMIGTDSIPGLSYTKEK 435

Query: 106 XXXXXXXXLMLPVYPSDHYGLLLTI 32
                   L LPV PSDHYGLLLTI
Sbjct: 436 KVGKDRKTLELPVLPSDHYGLLLTI 460


>ref|XP_004153226.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Cucumis sativus]
          Length = 485

 Score =  214 bits (545), Expect = 6e-54
 Identities = 98/145 (67%), Positives = 116/145 (80%)
 Frame = -3

Query: 466 CPGPPTWDQMFSKERVDQAKEALTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAK 287
           CP PPTW+QMFSKERV QAK+++ FL  + NV+F GDMNWDDKLDG  PFPDGW+DAW +
Sbjct: 338 CPAPPTWNQMFSKERVVQAKQSVGFLKETPNVIFGGDMNWDDKLDGRFPFPDGWIDAWEE 397

Query: 286 LRPREDGYTYDTKSNQMLSANRKLQKRLDRFLCSLQDYKISGIDMIGTEAIPGLSYCXXX 107
           LRP E+G+TYDTKSN+MLS NR LQKRLDRF+C LQD+K++ I+MIGT++IPGLSY    
Sbjct: 398 LRPGENGWTYDTKSNKMLSGNRTLQKRLDRFICKLQDFKVNSIEMIGTDSIPGLSYTKEK 457

Query: 106 XXXXXXXXLMLPVYPSDHYGLLLTI 32
                   L LPV PSDHYGLLLTI
Sbjct: 458 KVGKDRKTLELPVLPSDHYGLLLTI 482


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