BLASTX nr result

ID: Coptis21_contig00032087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032087
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511640.1| conserved hypothetical protein [Ricinus comm...   174   1e-41
ref|XP_002302513.1| predicted protein [Populus trichocarpa] gi|2...   161   8e-38
ref|XP_002326823.1| predicted protein [Populus trichocarpa] gi|1...   160   2e-37
ref|XP_002277033.1| PREDICTED: uncharacterized protein LOC100244...   159   4e-37
ref|XP_003516807.1| PREDICTED: uncharacterized protein LOC100797...   150   2e-34

>ref|XP_002511640.1| conserved hypothetical protein [Ricinus communis]
           gi|223548820|gb|EEF50309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score =  174 bits (441), Expect = 1e-41
 Identities = 84/125 (67%), Positives = 97/125 (77%), Gaps = 5/125 (4%)
 Frame = +1

Query: 82  MVDLQTVCCMCGDIGFPDKLFRCTKCSNRFQHSYCSNFYDESSSTAGFCDWCLSKERNGK 261
           MVDLQTVCCMCGD+GFPDKLF C KC +RFQHSYCSN+Y E S     CDWC S+ERN +
Sbjct: 1   MVDLQTVCCMCGDVGFPDKLFCCNKCRHRFQHSYCSNYYRELSEPIELCDWCQSEERNAR 60

Query: 262 H-VSSKKSI-GKEVGA---RSEYSHERIKHNDREDINVEKGKNTSGAPSPRQASRRYKSL 426
           H  SSKKS+ G ++G    RSEYS ++IK +DRED   EKGK+ SGAPSPR A+RRYK L
Sbjct: 61  HGNSSKKSVTGHDIGGVTNRSEYSGDKIKQHDREDSTAEKGKSPSGAPSPRTATRRYKLL 120

Query: 427 KDVMC 441
           KDVMC
Sbjct: 121 KDVMC 125


>ref|XP_002302513.1| predicted protein [Populus trichocarpa] gi|222844239|gb|EEE81786.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score =  161 bits (408), Expect = 8e-38
 Identities = 79/131 (60%), Positives = 93/131 (70%), Gaps = 11/131 (8%)
 Frame = +1

Query: 82  MVDLQTVCCMCGDIGFPDKLFRCTKCSNRFQHSYCSNFYDESSSTAGFCDWCLSKERNGK 261
           MVDLQTVCCMCGD+GFPDKLFRC KC NRFQHSYCSN+Y E S     CDWC S+ERN +
Sbjct: 1   MVDLQTVCCMCGDVGFPDKLFRCNKCRNRFQHSYCSNYYSEFSEPIELCDWCQSEERNAR 60

Query: 262 HVSSKKSIGK------EVGARSEYSHE-RIKHNDREDINV----EKGKNTSGAPSPRQAS 408
           H +S K  G        V  RSEY+ + +IK +DRE+ +     +KGKN SG PSPR ++
Sbjct: 61  HGNSSKKSGAGHDGGIVVTKRSEYTGDHKIKQHDREENSTTSSDQKGKNPSGIPSPRPST 120

Query: 409 RRYKSLKDVMC 441
           RRYK LKDVMC
Sbjct: 121 RRYKLLKDVMC 131


>ref|XP_002326823.1| predicted protein [Populus trichocarpa] gi|118487002|gb|ABK95332.1|
           unknown [Populus trichocarpa]
           gi|222835138|gb|EEE73573.1| predicted protein [Populus
           trichocarpa]
          Length = 131

 Score =  160 bits (405), Expect = 2e-37
 Identities = 79/131 (60%), Positives = 92/131 (70%), Gaps = 11/131 (8%)
 Frame = +1

Query: 82  MVDLQTVCCMCGDIGFPDKLFRCTKCSNRFQHSYCSNFYDESSSTAGFCDWCLSKERNGK 261
           MVD+QTVCCMCGD+GFPDKLFRC KC NRFQH YCSN+Y E S     CDWC S+ERN +
Sbjct: 1   MVDIQTVCCMCGDVGFPDKLFRCNKCRNRFQHLYCSNYYGEFSEPIEQCDWCQSEERNAR 60

Query: 262 HVSSKKSIGKE------VGARSEYSHE-RIKHNDREDINV----EKGKNTSGAPSPRQAS 408
           H +S K  G E      V  RSEYS + +IK +DRE+ +     +KGKN SG PSPR  +
Sbjct: 61  HGNSSKKSGAEHDSGTLVTKRSEYSGDHKIKQHDREENSTTSSDQKGKNPSGIPSPRPTT 120

Query: 409 RRYKSLKDVMC 441
           RRYK LKDVMC
Sbjct: 121 RRYKLLKDVMC 131


>ref|XP_002277033.1| PREDICTED: uncharacterized protein LOC100244418 [Vitis vinifera]
           gi|297734566|emb|CBI16617.3| unnamed protein product
           [Vitis vinifera]
          Length = 126

 Score =  159 bits (402), Expect = 4e-37
 Identities = 81/127 (63%), Positives = 94/127 (74%), Gaps = 7/127 (5%)
 Frame = +1

Query: 82  MVDLQT--VCCMCGDIGFPDKLFRCTKCSNRFQHSYCSNFYDESSSTAGFCDWCLSKERN 255
           MVD QT  VCCMCGD+GF DKLFRC KC NRFQHSYCSN+Y ESS     CDWC ++ER+
Sbjct: 1   MVDFQTATVCCMCGDVGFSDKLFRCHKCRNRFQHSYCSNYYSESSERMEVCDWCQTEERS 60

Query: 256 GKH--VSSKKSIG---KEVGARSEYSHERIKHNDREDINVEKGKNTSGAPSPRQASRRYK 420
                 SSKKS+G     V +RSEYS ++IK +DRE+ + EKGKN SGAPSPR  +RRYK
Sbjct: 61  ATRHGSSSKKSVGGLEAGVTSRSEYSGDKIKQHDREE-SGEKGKNPSGAPSPRPTTRRYK 119

Query: 421 SLKDVMC 441
            LKDVMC
Sbjct: 120 LLKDVMC 126


>ref|XP_003516807.1| PREDICTED: uncharacterized protein LOC100797722 [Glycine max]
          Length = 126

 Score =  150 bits (378), Expect = 2e-34
 Identities = 80/129 (62%), Positives = 90/129 (69%), Gaps = 9/129 (6%)
 Frame = +1

Query: 82  MVDLQTVCCMCGDIGFPDKLFRCTKCSNRFQHSYCSNFYDESSSTAGFCDWCLSKERNGK 261
           MVDLQTVCCMCGD+GFPDKLFRC KC NRFQHSYCSN+Y E       CDWC S+E+N +
Sbjct: 1   MVDLQTVCCMCGDVGFPDKLFRCNKCRNRFQHSYCSNYYGELPDIE-LCDWCHSEEKNLR 59

Query: 262 HVSSKK----SIGKEVGA--RSEYSHER-IKHND--REDINVEKGKNTSGAPSPRQASRR 414
           H+ S      S G E GA  RSEYS E+ IK +D  RE+   EKGK  S  PSPR  +RR
Sbjct: 60  HIGSNSKKPVSAGNEAGATHRSEYSGEKMIKQHDHHREESGSEKGK--SPTPSPRPGTRR 117

Query: 415 YKSLKDVMC 441
           YK LKDVMC
Sbjct: 118 YKLLKDVMC 126


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