BLASTX nr result

ID: Coptis21_contig00032072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032072
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865522.1| hypothetical protein ARALYDRAFT_917523 [Arab...    70   5e-10
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    62   1e-07
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    60   4e-07
ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus c...    59   1e-06
ref|XP_003595449.1| G-box binding factor bZIP transcription fact...    57   3e-06

>ref|XP_002865522.1| hypothetical protein ARALYDRAFT_917523 [Arabidopsis lyrata subsp.
           lyrata] gi|297311357|gb|EFH41781.1| hypothetical protein
           ARALYDRAFT_917523 [Arabidopsis lyrata subsp. lyrata]
          Length = 352

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
 Frame = -1

Query: 748 CPRCNNQVESTSHALFHCPMLKRIWYDSGLGLRTENWDPSDNLSSVLSSLINRHNNKHDI 569
           C RC N++E+  H LF CP ++ IW  +G+  + + WD        +  L++ H+NKH  
Sbjct: 62  CSRCCNELETNDHTLFSCPSIRPIWRAAGIPTQ-DLWDRDKPFEGKIRFLLDLHDNKH-- 118

Query: 568 IDMLSSVAT--TMYSIWIDRNDLIFNNKQTLITTILFRASAYITKNNQPLIRNTNWP--- 404
           ID +        ++ IW  RNDLIFN+K T    I+ +A    TK        T+ P   
Sbjct: 119 IDKVCRYLPFWLLWRIWKTRNDLIFNHKVTKGEDIVGQA-LIDTKEWLDCQDRTHGPQHD 177

Query: 403 --------SIGSDWC-----YI--STDASWVDNYTETGLGFALWNSVGICIGAG 287
                   S  S WC     Y+  + DAS  +    +GLG  + +S G C+  G
Sbjct: 178 GKLQGVRSSRSSKWCKPERGYVKCNFDASHYEGNQSSGLGRIIRDSNGTCLDCG 231


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 65/272 (23%), Positives = 102/272 (37%), Gaps = 28/272 (10%)
 Frame = -1

Query: 748  CPRCNNQVESTSHALFHCPMLKRIWYDSGLGLR--------TENWDPSDNLSSVLSSLIN 593
            C  C    E+ SH    C + + +W  S LG+R         E+W     + + L  L  
Sbjct: 1095 CSLCKQDKENESHLFRDCNISRHVWASSLLGIRICPMTVISIEDW-----IKNFLKLLWK 1149

Query: 592  RHNNKHDIIDMLSSVATTMYSIWIDRNDLIFNNKQTLITTIL---------FRASAYITK 440
                K      +S    T+++IWI RN++IF +++     I+          R S+    
Sbjct: 1150 EDGVKS---PRVSEFIATLWAIWIHRNNVIFRSEEVNPVAIMNLKIALLKEIRESSKFRD 1206

Query: 439  NNQPLIRNTNWPSIG---------SDWCYISTDASWVDNYTETGLGFALWNSV--GICIG 293
             N PL    N    G         SD C +  D +W  +  +       W+++     I 
Sbjct: 1207 RNNPLSHIENSRLEGCHVSQLDSTSDKCIVKVDGAWKRHKQKNPRAGIGWSALLDNSKIF 1266

Query: 292  AGHDXXXXXXXXXXXXXXXXXXXXXXXXXXITKVAILSDSQTLVAVLERRGTMLSWGATS 113
             G+D                          + +V I SDS+ LV  L  R     +   S
Sbjct: 1267 EGNDVVISLSSLQTEAHAVLRGLREAFAHGVNRVHICSDSRVLVQALHNR--QYPFEVAS 1324

Query: 112  IAHDIYFLLAKLVESKLYYVSRTLNFVAHSLA 17
            IAHDI  +  K +  K+ +V R +   AH+LA
Sbjct: 1325 IAHDIQAMCNKFLFCKIQHVGRDVVAPAHALA 1356


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 56/258 (21%), Positives = 100/258 (38%), Gaps = 12/258 (4%)
 Frame = -1

Query: 754  RPCPRCNNQVESTSHALFHCPMLKRIWYDSGLGLRTENWDPSDNLSSVLSSLINRHNNKH 575
            + C RC +  E+ +H LF CP  +  W  S L       + +++L   +  +++ H ++ 
Sbjct: 1090 KSCVRCPSHGETVNHLLFKCPFARLTWAISPLP-APPGGEWAESLFRNMHHVLSVHKSQP 1148

Query: 574  DIIDMLSSVATTMYSIWIDRNDLIFNNKQTLITTILFRASAYI-----TKNNQPLI---- 422
            +  D  + +   ++ +W +RNDL+F  ++     ++ +A+  +      K  QP +    
Sbjct: 1149 EESDHHALIPWILWRLWKNRNDLVFKGREFTAPQVILKATEDMDAWNNRKEPQPQVTSST 1208

Query: 421  --RNTNWPSIGSDWCYISTDASWVDNYTETGLGFALWNSVGICIGAG-HDXXXXXXXXXX 251
              R   W      W   +TD +W  +    G+G+ L N  G  +  G             
Sbjct: 1209 RDRCVKWQPPSHGWVKCNTDGAWSKDLGNCGVGWVLRNHTGRLLWLGLRALPSQQSVLET 1268

Query: 250  XXXXXXXXXXXXXXXXITKVAILSDSQTLVAVLERRGTMLSWGATSIAHDIYFLLAKLVE 71
                              +V   SDSQ LV++++    + S        DI  LL    E
Sbjct: 1269 EVEALRWAVLSLSRFNYRRVIFESDSQYLVSLIQNEMDIPSLAPR--IQDIRNLLRHFEE 1326

Query: 70   SKLYYVSRTLNFVAHSLA 17
             K  +  R  N VA   A
Sbjct: 1327 VKFQFTRREGNNVADRTA 1344


>ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus communis]
           gi|223534693|gb|EEF36385.1| hypothetical protein
           RCOM_0596960 [Ricinus communis]
          Length = 270

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 48/181 (26%), Positives = 74/181 (40%), Gaps = 28/181 (15%)
 Frame = -1

Query: 748 CPRCNNQVESTSHALFHCPMLKRIWYDSGLGLRTENWDPSDNLSSVLSSLINRHNNKHDI 569
           CP C+N  ES  HAL  C  +K +W                    V+S L++R N    I
Sbjct: 83  CPLCSNPGESIYHALIDCSFVKEVW--------------------VISVLVSRGNRNGSI 122

Query: 568 IDMLSS------------VATTMYSIWIDRNDLIFNNKQTLITTILFRASAYITK----- 440
            D L              +A  ++++WI RN++++N+K+     I+  A  Y+ +     
Sbjct: 123 CDWLQEIFTKFDKSTWHCIAAIVWNLWIHRNEVVWNSKRKQPRQIVDGAVTYLQRWLIAQ 182

Query: 439 --------NNQPLIRN-TNW--PSIGSDWCYISTDASWVDNYTETGLGFALWNSVGICIG 293
                   NN+    N   W  P  GS  C  + DAS  +     G G+ L N+ G  +G
Sbjct: 183 QTNPPSPDNNEVFNHNLAKWKKPKSGSLKC--NVDASTFNQQGMIGAGYVLRNTEGALLG 240

Query: 292 A 290
           A
Sbjct: 241 A 241


>ref|XP_003595449.1| G-box binding factor bZIP transcription factor [Medicago
           truncatula] gi|355484497|gb|AES65700.1| G-box binding
           factor bZIP transcription factor [Medicago truncatula]
          Length = 473

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 31/113 (27%), Positives = 58/113 (51%)
 Frame = -1

Query: 748 CPRCNNQVESTSHALFHCPMLKRIWYDSGLGLRTENWDPSDNLSSVLSSLINRHNNKHDI 569
           CPRC +++E+++HA   CP++ R+W+ S L L+  +      + +    LI++   +H  
Sbjct: 12  CPRCYSKIETSTHAFMECPLVSRVWFGSSLNLKILD----QRIKNFPERLIDK--IQHAK 65

Query: 568 IDMLSSVATTMYSIWIDRNDLIFNNKQTLITTILFRASAYITKNNQPLIRNTN 410
            ++L  + +  Y IW  RN  +F ++      I+ RA   I+   Q    N+N
Sbjct: 66  PEVLIQIVSITYYIWYARNLSVFKDRSLPEVEIIQRAYTSISDYRQANSTNSN 118