BLASTX nr result

ID: Coptis21_contig00032068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032068
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23367.3| unnamed protein product [Vitis vinifera]              234   1e-59
ref|XP_002273705.1| PREDICTED: F-box protein At1g70590 [Vitis vi...   234   1e-59
ref|XP_002527920.1| conserved hypothetical protein [Ricinus comm...   228   1e-57
ref|XP_004142966.1| PREDICTED: F-box protein At1g70590-like isof...   219   5e-55
ref|XP_002315673.1| predicted protein [Populus trichocarpa] gi|2...   218   6e-55

>emb|CBI23367.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score =  234 bits (597), Expect = 1e-59
 Identities = 112/153 (73%), Positives = 131/153 (85%)
 Frame = +2

Query: 2   PPNQKEAFKWLYKASVAGHARAQYQLALCLHQGRGVERDLTEAGKWYLRAAEGGYTRAMY 181
           PP ++EA KWLY +S AG+ RAQYQLALCLH+GRG++R+L EA +WYL+AAEGGY RAMY
Sbjct: 35  PPKREEAAKWLYLSSNAGYVRAQYQLALCLHRGRGMDRNLPEAARWYLKAAEGGYVRAMY 94

Query: 182 NTSLCYLSGEGLVHSHRQAKKWMKRAAECGHRKAQYEHGLLLFSKGEMMTALVYLELATR 361
           N SLCY  GEGLVHSHRQA++WMKRAA+ GH KAQ+EHGL LFS+GEMM A+VYLELATR
Sbjct: 95  NVSLCYSYGEGLVHSHRQARRWMKRAADRGHSKAQFEHGLGLFSEGEMMKAVVYLELATR 154

Query: 362 AGETAALSVKDVILENLSLNSRDYAMRLADKWR 460
           AGETAA  VK+VIL+ LS+ SRD AM LAD WR
Sbjct: 155 AGETAAAHVKNVILQQLSVTSRDRAMLLADNWR 187


>ref|XP_002273705.1| PREDICTED: F-box protein At1g70590 [Vitis vinifera]
          Length = 335

 Score =  234 bits (597), Expect = 1e-59
 Identities = 112/153 (73%), Positives = 131/153 (85%)
 Frame = +2

Query: 2   PPNQKEAFKWLYKASVAGHARAQYQLALCLHQGRGVERDLTEAGKWYLRAAEGGYTRAMY 181
           PP ++EA KWLY +S AG+ RAQYQLALCLH+GRG++R+L EA +WYL+AAEGGY RAMY
Sbjct: 177 PPKREEAAKWLYLSSNAGYVRAQYQLALCLHRGRGMDRNLPEAARWYLKAAEGGYVRAMY 236

Query: 182 NTSLCYLSGEGLVHSHRQAKKWMKRAAECGHRKAQYEHGLLLFSKGEMMTALVYLELATR 361
           N SLCY  GEGLVHSHRQA++WMKRAA+ GH KAQ+EHGL LFS+GEMM A+VYLELATR
Sbjct: 237 NVSLCYSYGEGLVHSHRQARRWMKRAADRGHSKAQFEHGLGLFSEGEMMKAVVYLELATR 296

Query: 362 AGETAALSVKDVILENLSLNSRDYAMRLADKWR 460
           AGETAA  VK+VIL+ LS+ SRD AM LAD WR
Sbjct: 297 AGETAAAHVKNVILQQLSVTSRDRAMLLADNWR 329


>ref|XP_002527920.1| conserved hypothetical protein [Ricinus communis]
           gi|223532695|gb|EEF34477.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 329

 Score =  228 bits (580), Expect = 1e-57
 Identities = 111/153 (72%), Positives = 124/153 (81%)
 Frame = +2

Query: 2   PPNQKEAFKWLYKASVAGHARAQYQLALCLHQGRGVERDLTEAGKWYLRAAEGGYTRAMY 181
           PP  KEA KWL +AS AGH RAQYQLALCLHQGRGV+ +L EA KWYL+AA GGY RAMY
Sbjct: 171 PPKPKEAIKWLLQASNAGHVRAQYQLALCLHQGRGVDHNLQEAAKWYLKAAAGGYVRAMY 230

Query: 182 NTSLCYLSGEGLVHSHRQAKKWMKRAAECGHRKAQYEHGLLLFSKGEMMTALVYLELATR 361
           N +LCY  GEGL  S+RQA+KWMKRAA+ GH KAQ+EHGL LFS+GEMM A+VYLELATR
Sbjct: 231 NVALCYSVGEGLAQSYRQARKWMKRAADRGHSKAQFEHGLGLFSEGEMMKAVVYLELATR 290

Query: 362 AGETAALSVKDVILENLSLNSRDYAMRLADKWR 460
           AGETAA  VK+VIL+ LS  SRD  M LAD WR
Sbjct: 291 AGETAAAHVKNVILQQLSTTSRDRVMLLADSWR 323


>ref|XP_004142966.1| PREDICTED: F-box protein At1g70590-like isoform 1 [Cucumis sativus]
           gi|449500305|ref|XP_004161061.1| PREDICTED: LOW QUALITY
           PROTEIN: F-box protein At1g70590-like [Cucumis sativus]
          Length = 368

 Score =  219 bits (557), Expect = 5e-55
 Identities = 105/154 (68%), Positives = 126/154 (81%)
 Frame = +2

Query: 2   PPNQKEAFKWLYKASVAGHARAQYQLALCLHQGRGVERDLTEAGKWYLRAAEGGYTRAMY 181
           PPN  EA KWL +ASV G+ RAQYQLALCL QG GV+R++ EA +W+++AAEGGY RAMY
Sbjct: 210 PPNPTEAVKWLRQASVVGNIRAQYQLALCLQQGHGVDRNVQEAARWFIKAAEGGYVRAMY 269

Query: 182 NTSLCYLSGEGLVHSHRQAKKWMKRAAECGHRKAQYEHGLLLFSKGEMMTALVYLELATR 361
           N SLCY  GEGLVH+H+QAKKWMKRAA+ GH KAQ+EHGL LFS+ +MM A+VYLELATR
Sbjct: 270 NLSLCYSCGEGLVHNHQQAKKWMKRAADRGHCKAQFEHGLHLFSERDMMKAVVYLELATR 329

Query: 362 AGETAALSVKDVILENLSLNSRDYAMRLADKWRP 463
           +GE AA  VK+VIL+ LS +SRD  M +AD WRP
Sbjct: 330 SGERAAGHVKNVILQQLSQSSRDRVMSVADNWRP 363


>ref|XP_002315673.1| predicted protein [Populus trichocarpa] gi|222864713|gb|EEF01844.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  218 bits (556), Expect = 6e-55
 Identities = 105/153 (68%), Positives = 121/153 (79%)
 Frame = +2

Query: 2   PPNQKEAFKWLYKASVAGHARAQYQLALCLHQGRGVERDLTEAGKWYLRAAEGGYTRAMY 181
           P  +KEA KWL++AS +GH RAQYQ ALCLHQG GV  +L EA +WYL+AAEGGY RAMY
Sbjct: 176 PSKRKEAVKWLFQASKSGHVRAQYQFALCLHQGSGVNCNLQEAARWYLKAAEGGYVRAMY 235

Query: 182 NTSLCYLSGEGLVHSHRQAKKWMKRAAECGHRKAQYEHGLLLFSKGEMMTALVYLELATR 361
           N +LCY  GEGL  SHR A+KWMKRAA+ GH KAQ+EHGL LFS+GE + A+VYLELATR
Sbjct: 236 NVALCYSVGEGLAQSHRLARKWMKRAADRGHSKAQFEHGLGLFSEGEQLKAVVYLELATR 295

Query: 362 AGETAALSVKDVILENLSLNSRDYAMRLADKWR 460
           AGETAA  VK+VIL+ LS  SRD  M LAD WR
Sbjct: 296 AGETAAAHVKNVILQQLSATSRDRVMNLADNWR 328


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