BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032062
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containi...    75   4e-12
emb|CBI19926.3| unnamed protein product [Vitis vinifera]               75   4e-12
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]    73   2e-11
ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10
ref|XP_003580963.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06

>ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Vitis vinifera]
          Length = 665

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/65 (52%), Positives = 47/65 (72%)
 Frame = -2

Query: 516 VARIRKAMQDRGIRKVTDHSWIGIKNRVFAFKGNPVLYCGSEGLYSILSLLVWEMVDKGY 337
           + R+R+AM+++G+RKV   SWIGIKN VF FK N +L+ G + +Y IL LL+ E+ D GY
Sbjct: 591 LVRVRRAMKEKGVRKVIGCSWIGIKNHVFVFKENQLLHIGGKDIYFILRLLIQEIEDDGY 650

Query: 336 ISQSY 322
            SQ Y
Sbjct: 651 ASQQY 655


>emb|CBI19926.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/65 (52%), Positives = 47/65 (72%)
 Frame = -2

Query: 516 VARIRKAMQDRGIRKVTDHSWIGIKNRVFAFKGNPVLYCGSEGLYSILSLLVWEMVDKGY 337
           + R+R+AM+++G+RKV   SWIGIKN VF FK N +L+ G + +Y IL LL+ E+ D GY
Sbjct: 338 LVRVRRAMKEKGVRKVIGCSWIGIKNHVFVFKENQLLHIGGKDIYFILRLLIQEIEDDGY 397

Query: 336 ISQSY 322
            SQ Y
Sbjct: 398 ASQQY 402


>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/65 (50%), Positives = 46/65 (70%)
 Frame = -2

Query: 516  VARIRKAMQDRGIRKVTDHSWIGIKNRVFAFKGNPVLYCGSEGLYSILSLLVWEMVDKGY 337
            + R+ +AM+++G+RKV   SWIGIKN VF FK N +L+ G + +Y IL LL+ E+ D GY
Sbjct: 1264 LVRVXRAMKEKGVRKVIGCSWIGIKNHVFVFKENQLLHIGGKDIYFILRLLIQEIEDDGY 1323

Query: 336  ISQSY 322
             SQ Y
Sbjct: 1324 ASQQY 1328


>ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Glycine max]
          Length = 630

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/61 (47%), Positives = 43/61 (70%)
 Frame = -2

Query: 516 VARIRKAMQDRGIRKVTDHSWIGIKNRVFAFKGNPVLYCGSEGLYSILSLLVWEMVDKGY 337
           + R+RKA ++RG ++   HSWIGIKN V+ F  N + + G + LY +L+LLVWEM  +GY
Sbjct: 570 MVRMRKAAENRGSKEFIGHSWIGIKNNVYTFASNQLQHYGGKDLYLVLNLLVWEMETEGY 629

Query: 336 I 334
           +
Sbjct: 630 V 630


>ref|XP_003580963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 683

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/57 (42%), Positives = 37/57 (64%)
 Frame = -2

Query: 516 VARIRKAMQDRGIRKVTDHSWIGIKNRVFAFKGNPVLYCGSEGLYSILSLLVWEMVD 346
           VAR+ + M+D+G +KV   SW+ IK+ +  F    V++ G E  Y++L LL WEM+D
Sbjct: 602 VARMWRLMEDQGAKKVQGCSWLCIKSEIHVFTSEQVVHLGGEATYAVLDLLFWEMMD 658