BLASTX nr result

ID: Coptis21_contig00032056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032056
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272456.1| PREDICTED: uncharacterized protein At5g39865...   106   2e-21
ref|NP_192801.1| Glutaredoxin family protein [Arabidopsis thalia...    94   1e-17
ref|XP_002518923.1| electron transporter, putative [Ricinus comm...    91   7e-17
ref|NP_001239943.1| uncharacterized protein LOC100780345 [Glycin...    91   1e-16
ref|XP_002874639.1| glutaredoxin family protein [Arabidopsis lyr...    91   1e-16

>ref|XP_002272456.1| PREDICTED: uncharacterized protein At5g39865 [Vitis vinifera]
          Length = 320

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/97 (57%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
 Frame = -1

Query: 340 STLLDHDDDFSQLGGGSRLGHHIVSLTSSTYGLLTIDXXXXXXXXXP---RFGLVSLFPS 170
           STLL+H+++  QL G S LGHHIVSLTS+TYGLL +D             RF L S+FPS
Sbjct: 6   STLLNHEEELGQLSG-STLGHHIVSLTSTTYGLLNLDPPPQPTHPPTLTPRFTLGSVFPS 64

Query: 169 PLPEPKSLRSDPEVINSWELMADLDCESSRFSPSPFS 59
           PL EP+ +RS+PEVINSWELMA LD +S RF P P +
Sbjct: 65  PLSEPRGIRSEPEVINSWELMAGLDADSFRFPPLPLA 101


>ref|NP_192801.1| Glutaredoxin family protein [Arabidopsis thaliana]
           gi|4115916|gb|AAD03427.1| F3H7.9 gene product
           [Arabidopsis thaliana] gi|4539441|emb|CAB40029.1|
           putative protein [Arabidopsis thaliana]
           gi|7267760|emb|CAB78186.1| putative protein [Arabidopsis
           thaliana] gi|332657511|gb|AEE82911.1| Glutaredoxin
           family protein [Arabidopsis thaliana]
          Length = 334

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/96 (52%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
 Frame = -1

Query: 340 STLLDHDDDFSQLGGGSR-LGHHIVSLTSSTYGLLTIDXXXXXXXXXP---RFGLVSLFP 173
           S LL+HD+DFSQ+GGGS   GHHIV LTS+TYGLLT+D             +F + +   
Sbjct: 6   SNLLNHDEDFSQIGGGSSAFGHHIVKLTSTTYGLLTLDPPPPPSPPMTPPEKFTVDTKSK 65

Query: 172 SPLPEPKSLRSDPEVINSWELMADLDCESSRFSPSP 65
           S   EP+ ++S+PE+INSWELM+ LD ES RF+P P
Sbjct: 66  SIWSEPRVIKSEPEIINSWELMSGLDGESFRFTPLP 101


>ref|XP_002518923.1| electron transporter, putative [Ricinus communis]
           gi|223541910|gb|EEF43456.1| electron transporter,
           putative [Ricinus communis]
          Length = 327

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 55/101 (54%), Positives = 65/101 (64%), Gaps = 11/101 (10%)
 Frame = -1

Query: 340 STLLDHDDDFSQLGGGSRLGHHIVSLTSSTYGLLTIDXXXXXXXXXP-------RFGLVS 182
           S LL+++D+ +QLG  S L HHIVSLTS+TYGLL +D                 RF L S
Sbjct: 6   SNLLNNEDELTQLGS-SALSHHIVSLTSTTYGLLNLDPPTPQSSATATTPPPPARFTLGS 64

Query: 181 LFPSPLPEPKSL----RSDPEVINSWELMADLDCESSRFSP 71
           +FPSPL EPKSL    RS PE INSWELM+ LD +S RFSP
Sbjct: 65  IFPSPLCEPKSLWSEPRSLPETINSWELMSGLDTDSFRFSP 105


>ref|NP_001239943.1| uncharacterized protein LOC100780345 [Glycine max]
           gi|255642823|gb|ACU22113.1| unknown [Glycine max]
          Length = 270

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 53/95 (55%), Positives = 60/95 (63%)
 Frame = -1

Query: 340 STLLDHDDDFSQLGGGSRLGHHIVSLTSSTYGLLTIDXXXXXXXXXPRFGLVSLFPSPLP 161
           S LL+ D+DFS   G S LGHHIVSLTS+TYGLLT+D          RF L SLFP    
Sbjct: 6   SNLLNQDEDFSTQLGSSALGHHIVSLTSTTYGLLTLD---PPSTPPSRFTLGSLFP---- 58

Query: 160 EPKSLRSDPEVINSWELMADLDCESSRFSPSPFSK 56
                 S+PEVINSWELM+ LD +S RFSP P  K
Sbjct: 59  ------SEPEVINSWELMSGLDTDSFRFSPLPLPK 87


>ref|XP_002874639.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320476|gb|EFH50898.1| glutaredoxin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 325

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 49/97 (50%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
 Frame = -1

Query: 340 STLLDHDDDFSQLGGGSR-LGHHIVSLTSSTYGLLTIDXXXXXXXXXPRFGLVSLFP--- 173
           S LL+HD+DF Q+GGGS   GHHIV LTS+TYGLLT+D             +    P   
Sbjct: 6   SNLLNHDEDFPQIGGGSSAFGHHIVKLTSTTYGLLTLDPPPPSSAAFSSDNMPMTPPDKS 65

Query: 172 -SPLPEPKSLRSDPEVINSWELMADLDCESSRFSPSP 65
            S   EP+ ++S+PE+INSWELM+ LD ES RF+P P
Sbjct: 66  KSLWSEPRLIKSEPEIINSWELMSGLDGESFRFTPLP 102


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