BLASTX nr result
ID: Coptis21_contig00032041
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00032041 (761 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog... 65 1e-08 gb|AFK46628.1| unknown [Lotus japonicus] 65 2e-08 ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog... 64 3e-08 dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas] 63 6e-08 ref|XP_002512940.1| Splicing factor U2AF-associated protein, put... 63 8e-08 >ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max] Length = 500 Score = 65.5 bits (158), Expect = 1e-08 Identities = 32/68 (47%), Positives = 42/68 (61%) Frame = -3 Query: 753 RLNANFFLKLEMSLLKECRKFGPIDYMRVLENHPGGVVLVRVKSKNVAQDIANFMNGRRI 574 R + N L+LE + +EC K GP+D +++ ENHP GVVLVR K + AQ MNGR Sbjct: 402 RADENLHLELEEDVKEECTKLGPVDSVKICENHPQGVVLVRFKDRKDAQKCIELMNGRWF 461 Query: 573 DNRQICAN 550 RQI A+ Sbjct: 462 GGRQIHAS 469 >gb|AFK46628.1| unknown [Lotus japonicus] Length = 162 Score = 65.1 bits (157), Expect = 2e-08 Identities = 34/68 (50%), Positives = 43/68 (63%) Frame = -3 Query: 753 RLNANFFLKLEMSLLKECRKFGPIDYMRVLENHPGGVVLVRVKSKNVAQDIANFMNGRRI 574 R + N L+LE + +EC K GPID ++V ENHP GVVLVR K + AQ + MNGR Sbjct: 64 RADENLRLELEEDVKEECTKLGPIDSVKVCENHPQGVVLVRFKDRKDAQTCIDTMNGRWF 123 Query: 573 DNRQICAN 550 RQI A+ Sbjct: 124 GGRQIHAS 131 >ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max] Length = 503 Score = 64.3 bits (155), Expect = 3e-08 Identities = 32/68 (47%), Positives = 42/68 (61%) Frame = -3 Query: 753 RLNANFFLKLEMSLLKECRKFGPIDYMRVLENHPGGVVLVRVKSKNVAQDIANFMNGRRI 574 R + N L+LE + +EC K GP+D +++ ENHP GVVLVR K + AQ MNGR Sbjct: 405 RADENLRLELEEDVKEECTKLGPLDSVKICENHPQGVVLVRFKDRKDAQKCIELMNGRWF 464 Query: 573 DNRQICAN 550 RQI A+ Sbjct: 465 GGRQIHAS 472 >dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas] Length = 552 Score = 63.2 bits (152), Expect = 6e-08 Identities = 31/68 (45%), Positives = 42/68 (61%) Frame = -3 Query: 753 RLNANFFLKLEMSLLKECRKFGPIDYMRVLENHPGGVVLVRVKSKNVAQDIANFMNGRRI 574 R + N +LE+ + +EC K GP+D ++V ENHP GVVLVR K + AQ MNGR Sbjct: 454 RADENLRSELELDVKEECVKLGPVDSVKVCENHPQGVVLVRFKDRKDAQKCIELMNGRWF 513 Query: 573 DNRQICAN 550 RQ+ A+ Sbjct: 514 GGRQVHAS 521 >ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus communis] gi|223547951|gb|EEF49443.1| Splicing factor U2AF-associated protein, putative [Ricinus communis] Length = 518 Score = 62.8 bits (151), Expect = 8e-08 Identities = 30/68 (44%), Positives = 43/68 (63%) Frame = -3 Query: 753 RLNANFFLKLEMSLLKECRKFGPIDYMRVLENHPGGVVLVRVKSKNVAQDIANFMNGRRI 574 R + N +LE+ + +EC K GP+D ++V ENHP GVVLV+ K + AQ+ MNGR Sbjct: 420 RTDENLRSELEVDIREECVKLGPVDSVKVCENHPQGVVLVKFKDRKDAQNCIELMNGRWF 479 Query: 573 DNRQICAN 550 RQ+ A+ Sbjct: 480 GGRQVHAS 487