BLASTX nr result

ID: Coptis21_contig00032032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032032
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260...   110   2e-22
ref|XP_002535466.1| conserved hypothetical protein [Ricinus comm...    95   5e-18
ref|XP_004171939.1| PREDICTED: growth-regulating factor 6-like [...    93   2e-17
ref|XP_004143032.1| PREDICTED: growth-regulating factor 6-like [...    93   2e-17
ref|XP_002320016.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16

>ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260890 [Vitis vinifera]
          Length = 604

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/137 (44%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
 Frame = -1

Query: 391 PTPKHPFRHFIDDWPKNKSDNSACT--------DQTQLXXXXXXXXXXXXXXXXXNMREK 236
           P  +H  RHFIDDWPKN+SD +A +        D+TQL                    +K
Sbjct: 408 PDSQHSLRHFIDDWPKNQSDRTAISWPDIDLQSDRTQLSISIPMASSDFMSSTSSPTNDK 467

Query: 235 PNPTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPISWETSMGGPLGEALNKTNRTAI 56
              + L  S EF+PIQM LGVGS  NE  +R AN +PISWETSMGGPLGE L+ TN    
Sbjct: 468 LTLSPLRLSREFDPIQMGLGVGSVLNEPNQRQANWIPISWETSMGGPLGEVLHSTNNNGG 527

Query: 55  EYKSSVPAFDFITKGWN 5
           + K+S  A + +T+GW+
Sbjct: 528 DCKNS-SALNLMTEGWD 543


>ref|XP_002535466.1| conserved hypothetical protein [Ricinus communis]
           gi|223523019|gb|EEF26917.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 352

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 58/136 (42%), Positives = 80/136 (58%), Gaps = 9/136 (6%)
 Frame = -1

Query: 382 KHPFRHFIDDWPKNKSDNSACT--------DQTQLXXXXXXXXXXXXXXXXXNMR-EKPN 230
           +H  R F+DDWPK++SD SA +        D+TQL                 +   EK  
Sbjct: 159 QHSVRQFMDDWPKSQSDRSAVSWPQLDVQSDRTQLSISIPIGHHADYMSSTSSPNNEKVT 218

Query: 229 PTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPISWETSMGGPLGEALNKTNRTAIEY 50
            + L  S + +PIQM LGVGS  N+Q +R AN +PISWETS+GGPLGE L+ T+ +A E 
Sbjct: 219 LSPLRLSRDLDPIQMGLGVGSVINDQNQRQANWIPISWETSIGGPLGEVLHNTSNSA-EC 277

Query: 49  KSSVPAFDFITKGWNT 2
           KSS  A + +T+GW++
Sbjct: 278 KSS-SALNLMTEGWDS 292


>ref|XP_004171939.1| PREDICTED: growth-regulating factor 6-like [Cucumis sativus]
          Length = 664

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/135 (38%), Positives = 71/135 (52%), Gaps = 10/135 (7%)
 Frame = -1

Query: 379 HPFRHFIDDWPKNKSDNSACT----------DQTQLXXXXXXXXXXXXXXXXXNMREKPN 230
           H  R F ++WPKN+ D+S+ +          D+TQL                    +K  
Sbjct: 469 HSLRQFFNNWPKNQPDSSSVSWSNSNLDPQSDRTQLSISIPMATSDFRSSTSSPANDKLT 528

Query: 229 PTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPISWETSMGGPLGEALNKTNRTAIEY 50
            + L  + E +PIQM LGVG+  +E   R AN +PISWE+SMGGPLGE LN TN    E 
Sbjct: 529 LSPLKSAQELDPIQMGLGVGNVMDEPNNRQANWIPISWESSMGGPLGEVLNSTNNNGGES 588

Query: 49  KSSVPAFDFITKGWN 5
           KSS    + +T+GW+
Sbjct: 589 KSS-SMLNLMTEGWD 602


>ref|XP_004143032.1| PREDICTED: growth-regulating factor 6-like [Cucumis sativus]
          Length = 672

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/135 (38%), Positives = 71/135 (52%), Gaps = 10/135 (7%)
 Frame = -1

Query: 379 HPFRHFIDDWPKNKSDNSACT----------DQTQLXXXXXXXXXXXXXXXXXNMREKPN 230
           H  R F ++WPKN+ D+S+ +          D+TQL                    +K  
Sbjct: 477 HSLRQFFNNWPKNQPDSSSVSWSNSNLDPQSDRTQLSISIPMATSDFRSSTSSPANDKLT 536

Query: 229 PTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPISWETSMGGPLGEALNKTNRTAIEY 50
            + L  + E +PIQM LGVG+  +E   R AN +PISWE+SMGGPLGE LN TN    E 
Sbjct: 537 LSPLKSAQELDPIQMGLGVGNVMDEPNNRQANWIPISWESSMGGPLGEVLNSTNNNGGES 596

Query: 49  KSSVPAFDFITKGWN 5
           KSS    + +T+GW+
Sbjct: 597 KSS-SMLNLMTEGWD 610


>ref|XP_002320016.1| predicted protein [Populus trichocarpa] gi|222860789|gb|EEE98331.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 53/138 (38%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
 Frame = -1

Query: 382 KHPFRHFIDDWPKNKSDNSACT--------DQTQLXXXXXXXXXXXXXXXXXNMREKPNP 227
           +H  R F+DDWPK++SD SA +        ++TQL                    EK   
Sbjct: 89  QHSLRQFMDDWPKSQSDRSAVSWPELDQQSERTQLSISIPMAPADFMSSTSSPNNEKVTL 148

Query: 226 TQLSGSHEFNPIQMSLGVGSN----PNEQTRRPANLLPISWETSMGGPLGEALNKTNRTA 59
           + L  S EF+PIQM LGVG       NE  +R AN +PISW TSMGGPLGE L+ TN  A
Sbjct: 149 SPLRLSREFDPIQMGLGVGGGGGGIANEPNQRQANWIPISWGTSMGGPLGEVLHNTNNNA 208

Query: 58  IEYKSSVPAFDFITKGWN 5
                +  + + +T  W+
Sbjct: 209 AAECKTTSSLNLMTYRWD 226


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