BLASTX nr result
ID: Coptis21_contig00032032
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00032032 (415 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260... 110 2e-22 ref|XP_002535466.1| conserved hypothetical protein [Ricinus comm... 95 5e-18 ref|XP_004171939.1| PREDICTED: growth-regulating factor 6-like [... 93 2e-17 ref|XP_004143032.1| PREDICTED: growth-regulating factor 6-like [... 93 2e-17 ref|XP_002320016.1| predicted protein [Populus trichocarpa] gi|2... 91 1e-16 >ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260890 [Vitis vinifera] Length = 604 Score = 110 bits (274), Expect = 2e-22 Identities = 61/137 (44%), Positives = 78/137 (56%), Gaps = 8/137 (5%) Frame = -1 Query: 391 PTPKHPFRHFIDDWPKNKSDNSACT--------DQTQLXXXXXXXXXXXXXXXXXNMREK 236 P +H RHFIDDWPKN+SD +A + D+TQL +K Sbjct: 408 PDSQHSLRHFIDDWPKNQSDRTAISWPDIDLQSDRTQLSISIPMASSDFMSSTSSPTNDK 467 Query: 235 PNPTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPISWETSMGGPLGEALNKTNRTAI 56 + L S EF+PIQM LGVGS NE +R AN +PISWETSMGGPLGE L+ TN Sbjct: 468 LTLSPLRLSREFDPIQMGLGVGSVLNEPNQRQANWIPISWETSMGGPLGEVLHSTNNNGG 527 Query: 55 EYKSSVPAFDFITKGWN 5 + K+S A + +T+GW+ Sbjct: 528 DCKNS-SALNLMTEGWD 543 >ref|XP_002535466.1| conserved hypothetical protein [Ricinus communis] gi|223523019|gb|EEF26917.1| conserved hypothetical protein [Ricinus communis] Length = 352 Score = 95.1 bits (235), Expect = 5e-18 Identities = 58/136 (42%), Positives = 80/136 (58%), Gaps = 9/136 (6%) Frame = -1 Query: 382 KHPFRHFIDDWPKNKSDNSACT--------DQTQLXXXXXXXXXXXXXXXXXNMR-EKPN 230 +H R F+DDWPK++SD SA + D+TQL + EK Sbjct: 159 QHSVRQFMDDWPKSQSDRSAVSWPQLDVQSDRTQLSISIPIGHHADYMSSTSSPNNEKVT 218 Query: 229 PTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPISWETSMGGPLGEALNKTNRTAIEY 50 + L S + +PIQM LGVGS N+Q +R AN +PISWETS+GGPLGE L+ T+ +A E Sbjct: 219 LSPLRLSRDLDPIQMGLGVGSVINDQNQRQANWIPISWETSIGGPLGEVLHNTSNSA-EC 277 Query: 49 KSSVPAFDFITKGWNT 2 KSS A + +T+GW++ Sbjct: 278 KSS-SALNLMTEGWDS 292 >ref|XP_004171939.1| PREDICTED: growth-regulating factor 6-like [Cucumis sativus] Length = 664 Score = 93.2 bits (230), Expect = 2e-17 Identities = 52/135 (38%), Positives = 71/135 (52%), Gaps = 10/135 (7%) Frame = -1 Query: 379 HPFRHFIDDWPKNKSDNSACT----------DQTQLXXXXXXXXXXXXXXXXXNMREKPN 230 H R F ++WPKN+ D+S+ + D+TQL +K Sbjct: 469 HSLRQFFNNWPKNQPDSSSVSWSNSNLDPQSDRTQLSISIPMATSDFRSSTSSPANDKLT 528 Query: 229 PTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPISWETSMGGPLGEALNKTNRTAIEY 50 + L + E +PIQM LGVG+ +E R AN +PISWE+SMGGPLGE LN TN E Sbjct: 529 LSPLKSAQELDPIQMGLGVGNVMDEPNNRQANWIPISWESSMGGPLGEVLNSTNNNGGES 588 Query: 49 KSSVPAFDFITKGWN 5 KSS + +T+GW+ Sbjct: 589 KSS-SMLNLMTEGWD 602 >ref|XP_004143032.1| PREDICTED: growth-regulating factor 6-like [Cucumis sativus] Length = 672 Score = 93.2 bits (230), Expect = 2e-17 Identities = 52/135 (38%), Positives = 71/135 (52%), Gaps = 10/135 (7%) Frame = -1 Query: 379 HPFRHFIDDWPKNKSDNSACT----------DQTQLXXXXXXXXXXXXXXXXXNMREKPN 230 H R F ++WPKN+ D+S+ + D+TQL +K Sbjct: 477 HSLRQFFNNWPKNQPDSSSVSWSNSNLDPQSDRTQLSISIPMATSDFRSSTSSPANDKLT 536 Query: 229 PTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPISWETSMGGPLGEALNKTNRTAIEY 50 + L + E +PIQM LGVG+ +E R AN +PISWE+SMGGPLGE LN TN E Sbjct: 537 LSPLKSAQELDPIQMGLGVGNVMDEPNNRQANWIPISWESSMGGPLGEVLNSTNNNGGES 596 Query: 49 KSSVPAFDFITKGWN 5 KSS + +T+GW+ Sbjct: 597 KSS-SMLNLMTEGWD 610 >ref|XP_002320016.1| predicted protein [Populus trichocarpa] gi|222860789|gb|EEE98331.1| predicted protein [Populus trichocarpa] Length = 286 Score = 90.9 bits (224), Expect = 1e-16 Identities = 53/138 (38%), Positives = 70/138 (50%), Gaps = 12/138 (8%) Frame = -1 Query: 382 KHPFRHFIDDWPKNKSDNSACT--------DQTQLXXXXXXXXXXXXXXXXXNMREKPNP 227 +H R F+DDWPK++SD SA + ++TQL EK Sbjct: 89 QHSLRQFMDDWPKSQSDRSAVSWPELDQQSERTQLSISIPMAPADFMSSTSSPNNEKVTL 148 Query: 226 TQLSGSHEFNPIQMSLGVGSN----PNEQTRRPANLLPISWETSMGGPLGEALNKTNRTA 59 + L S EF+PIQM LGVG NE +R AN +PISW TSMGGPLGE L+ TN A Sbjct: 149 SPLRLSREFDPIQMGLGVGGGGGGIANEPNQRQANWIPISWGTSMGGPLGEVLHNTNNNA 208 Query: 58 IEYKSSVPAFDFITKGWN 5 + + + +T W+ Sbjct: 209 AAECKTTSSLNLMTYRWD 226