BLASTX nr result

ID: Coptis21_contig00032020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032020
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317225.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
emb|CBI36071.3| unnamed protein product [Vitis vinifera]              144   7e-33
ref|XP_002278331.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   144   7e-33
emb|CAN77674.1| hypothetical protein VITISV_013720 [Vitis vinifera]   144   1e-32
ref|XP_003627031.1| 1-aminocyclopropane-1-carboxylate oxidase [M...   135   5e-30

>ref|XP_002317225.1| predicted protein [Populus trichocarpa] gi|222860290|gb|EEE97837.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/137 (54%), Positives = 92/137 (67%)
 Frame = -2

Query: 451 KVVFKLIEHAPMASTKLTNMTDGQGLHDLVCYLHKHHRYTSVSRCDGSLKSDFIRMLIRG 272
           K++  L E+ P  S    +M   Q L   VC L+KH R     R    L  D   MLIRG
Sbjct: 195 KILQVLQENCPRKSKYANDMMQRQDLIGPVCCLYKHRRDIPADRLASYLGYDVFSMLIRG 254

Query: 271 SADYSHALCVHVCDDSSDFHVYSKKSWISFTPSRDAIVMTIGDQIQARSGGHYKNVIGRP 92
           + DYSHALC+H+CD SS FHVYSKK W+SF P +DA+++T+GDQ QA SGG YK V+GRP
Sbjct: 255 T-DYSHALCLHLCDASSQFHVYSKKGWVSFCPDKDALIVTVGDQTQAWSGGQYKQVLGRP 313

Query: 91  IFKVEDEEPISLAFLFS 41
           IFK EDE+ IS+AFL+S
Sbjct: 314 IFKGEDEDNISMAFLYS 330


>emb|CBI36071.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score =  144 bits (363), Expect = 7e-33
 Identities = 73/147 (49%), Positives = 108/147 (73%), Gaps = 2/147 (1%)
 Frame = -2

Query: 445 VFKLIEHAPMASTKLTN-MTDGQGLHDLVCYLHKHHRYTSVSRCDGSLKSDFIRMLIRGS 269
           +  +++   + ++K  N M   Q +   +C+L+KH++  S  R  GSL+ D IRMLIRG 
Sbjct: 47  ILLILKETSLKNSKFGNEMIPEQEVIGTICHLYKHYKTASSDRWAGSLRYDVIRMLIRGF 106

Query: 268 ADYSHALCVHVCDDSSDFHVYSKKSWISFTPSRDAIVMTIGDQIQARSGGHYKNVIGRPI 89
            D SH+LC+HVC++SS+FH+YSKK WISF P +DA+++TIGDQ+QA SGG YK+VIGRPI
Sbjct: 107 -DCSHSLCLHVCNESSEFHIYSKKGWISFCPDKDALLVTIGDQMQAWSGGQYKHVIGRPI 165

Query: 88  FKVED-EEPISLAFLFSYKPITQRSHM 11
           FK E+ ++ IS+AFL+S   I++ S++
Sbjct: 166 FKGENHKDGISMAFLYSPPTISKSSNV 192


>ref|XP_002278331.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase [Vitis
           vinifera]
          Length = 373

 Score =  144 bits (363), Expect = 7e-33
 Identities = 73/147 (49%), Positives = 108/147 (73%), Gaps = 2/147 (1%)
 Frame = -2

Query: 445 VFKLIEHAPMASTKLTN-MTDGQGLHDLVCYLHKHHRYTSVSRCDGSLKSDFIRMLIRGS 269
           +  +++   + ++K  N M   Q +   +C+L+KH++  S  R  GSL+ D IRMLIRG 
Sbjct: 195 ILLILKETSLKNSKFGNEMIPEQEVIGTICHLYKHYKTASSDRWAGSLRYDVIRMLIRGF 254

Query: 268 ADYSHALCVHVCDDSSDFHVYSKKSWISFTPSRDAIVMTIGDQIQARSGGHYKNVIGRPI 89
            D SH+LC+HVC++SS+FH+YSKK WISF P +DA+++TIGDQ+QA SGG YK+VIGRPI
Sbjct: 255 -DCSHSLCLHVCNESSEFHIYSKKGWISFCPDKDALLVTIGDQMQAWSGGQYKHVIGRPI 313

Query: 88  FKVED-EEPISLAFLFSYKPITQRSHM 11
           FK E+ ++ IS+AFL+S   I++ S++
Sbjct: 314 FKGENHKDGISMAFLYSPPTISKSSNV 340


>emb|CAN77674.1| hypothetical protein VITISV_013720 [Vitis vinifera]
          Length = 373

 Score =  144 bits (362), Expect = 1e-32
 Identities = 75/148 (50%), Positives = 107/148 (72%), Gaps = 1/148 (0%)
 Frame = -2

Query: 451 KVVFKLIEHAPMASTKLTNMTDGQGLHDLVCYLHKHHRYTSVSRCDGSLKSDFIRMLIRG 272
           K++  L E++   S     M   Q +   +C+L+KH++  S  R  GSL+ D IRMLIRG
Sbjct: 194 KILLILKENSLKNSKFGNEMIPEQEVIGTICHLYKHYKTASSDRWAGSLRYDVIRMLIRG 253

Query: 271 SADYSHALCVHVCDDSSDFHVYSKKSWISFTPSRDAIVMTIGDQIQARSGGHYKNVIGRP 92
             D SH+LC+HVC++SS+FH+YSKK WISF P +DA+++TIGDQ+QA SGG YK+VIGRP
Sbjct: 254 F-DCSHSLCLHVCNESSEFHIYSKKGWISFCPDKDALLVTIGDQMQAWSGGQYKHVIGRP 312

Query: 91  IFKVED-EEPISLAFLFSYKPITQRSHM 11
           IFK E+ ++ IS+AFL+S   I++ S++
Sbjct: 313 IFKGENHKDGISMAFLYSPPTISKSSNV 340


>ref|XP_003627031.1| 1-aminocyclopropane-1-carboxylate oxidase [Medicago truncatula]
           gi|355521053|gb|AET01507.1|
           1-aminocyclopropane-1-carboxylate oxidase [Medicago
           truncatula]
          Length = 369

 Score =  135 bits (339), Expect = 5e-30
 Identities = 67/111 (60%), Positives = 88/111 (79%), Gaps = 3/111 (2%)
 Frame = -2

Query: 364 VCYLHKHHRYTSVSRCD---GSLKSDFIRMLIRGSADYSHALCVHVCDDSSDFHVYSKKS 194
           +C ++KHH+   ++R D    SLK D IRMLIRG+ DYSH+LC+HVCD SS+FHVYSKKS
Sbjct: 221 LCCIYKHHQ--DINRNDHWVDSLKYDVIRMLIRGT-DYSHSLCLHVCDGSSEFHVYSKKS 277

Query: 193 WISFTPSRDAIVMTIGDQIQARSGGHYKNVIGRPIFKVEDEEPISLAFLFS 41
           W++F P + A+V+T GDQIQ  SGGHYK+VIG+ IFK + E+ IS+AFL+S
Sbjct: 278 WLTFCPEQGALVITAGDQIQVLSGGHYKDVIGKAIFKGKREDNISMAFLYS 328


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