BLASTX nr result
ID: Coptis21_contig00032016
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00032016
(378 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAH56489.1| pectin methylesterase 1 [Prunus persica] 218 4e-55
ref|XP_002516192.1| Pectinesterase PPE8B precursor, putative [Ri... 216 2e-54
ref|NP_180212.1| pectinesterase 12 [Arabidopsis thaliana] gi|753... 208 3e-52
ref|XP_002273499.2| PREDICTED: uncharacterized protein LOC100257... 207 5e-52
ref|XP_002878961.1| pectinesterase family protein [Arabidopsis l... 206 2e-51
>dbj|BAH56489.1| pectin methylesterase 1 [Prunus persica]
Length = 543
Score = 218 bits (555), Expect = 4e-55
Identities = 97/126 (76%), Positives = 113/126 (89%)
Frame = -1
Query: 378 TFENTAGPEKHQAVALRINADLSAIYHCVVNGYQDTLYPHSFRQFYRECDISGTIDYIFG 199
TFENTAGPEKHQAVALR+NAD +AIY C++NGYQDTLY HSFRQFYRECDI GTIDYIFG
Sbjct: 327 TFENTAGPEKHQAVALRVNADFAAIYKCIINGYQDTLYVHSFRQFYRECDIFGTIDYIFG 386
Query: 198 NGVVVFQGCNIISRLPLPGQFNAITAQSRDIAEEDTGFSIQNCSILASEELYANKMSVKS 19
N V+FQGC+I+S++P+PGQF ITAQSRD A+EDTG SIQNCSI+A+++LY+N VKS
Sbjct: 387 NAAVIFQGCDIVSKMPMPGQFTVITAQSRDTADEDTGISIQNCSIVATDDLYSNSSIVKS 446
Query: 18 YLGRPW 1
YLGRPW
Sbjct: 447 YLGRPW 452
>ref|XP_002516192.1| Pectinesterase PPE8B precursor, putative [Ricinus communis]
gi|223544678|gb|EEF46194.1| Pectinesterase PPE8B
precursor, putative [Ricinus communis]
Length = 543
Score = 216 bits (550), Expect = 2e-54
Identities = 100/126 (79%), Positives = 111/126 (88%)
Frame = -1
Query: 378 TFENTAGPEKHQAVALRINADLSAIYHCVVNGYQDTLYPHSFRQFYRECDISGTIDYIFG 199
T ENTAG +KHQAVALRINADL+A+Y C +NGYQDTLY HSFRQFYRECDI GTIDYIFG
Sbjct: 327 TIENTAGAQKHQAVALRINADLAAMYRCTINGYQDTLYVHSFRQFYRECDIYGTIDYIFG 386
Query: 198 NGVVVFQGCNIISRLPLPGQFNAITAQSRDIAEEDTGFSIQNCSILASEELYANKMSVKS 19
N VVFQ CNI+S++PLPGQF ITAQSR+I EEDTG SIQNCSILA+E+LY+N SVKS
Sbjct: 387 NAAVVFQACNIVSKMPLPGQFTVITAQSREIPEEDTGISIQNCSILATEDLYSNASSVKS 446
Query: 18 YLGRPW 1
YLGRPW
Sbjct: 447 YLGRPW 452
>ref|NP_180212.1| pectinesterase 12 [Arabidopsis thaliana]
gi|75318311|sp|O48711.1|PME12_ARATH RecName:
Full=Probable pectinesterase/pectinesterase inhibitor
12; Includes: RecName: Full=Pectinesterase inhibitor 12;
AltName: Full=Pectin methylesterase inhibitor 12;
Includes: RecName: Full=Pectinesterase 12; Short=PE 12;
AltName: Full=Pectin methylesterase 12; Short=AtPME12;
Flags: Precursor gi|2739369|gb|AAC14493.1| putative
pectinesterase [Arabidopsis thaliana]
gi|18176445|gb|AAL60045.1| putative pectinesterase
[Arabidopsis thaliana] gi|21689727|gb|AAM67485.1|
putative pectinesterase [Arabidopsis thaliana]
gi|330252745|gb|AEC07839.1| pectinesterase 12
[Arabidopsis thaliana]
Length = 547
Score = 208 bits (530), Expect = 3e-52
Identities = 95/123 (77%), Positives = 107/123 (86%)
Frame = -1
Query: 369 NTAGPEKHQAVALRINADLSAIYHCVVNGYQDTLYPHSFRQFYRECDISGTIDYIFGNGV 190
NTAGPEKHQAVALR+NAD A+Y CV++GYQDTLY HSFRQFYRECDI GTIDYIFGN
Sbjct: 334 NTAGPEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAA 393
Query: 189 VVFQGCNIISRLPLPGQFNAITAQSRDIAEEDTGFSIQNCSILASEELYANKMSVKSYLG 10
VVFQGCNI+S+LP+PGQF ITAQSRD +EDTG S+QNCSILASE+L+ + VKSYLG
Sbjct: 394 VVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLG 453
Query: 9 RPW 1
RPW
Sbjct: 454 RPW 456
>ref|XP_002273499.2| PREDICTED: uncharacterized protein LOC100257766 [Vitis vinifera]
Length = 1456
Score = 207 bits (528), Expect = 5e-52
Identities = 94/126 (74%), Positives = 110/126 (87%)
Frame = -1
Query: 378 TFENTAGPEKHQAVALRINADLSAIYHCVVNGYQDTLYPHSFRQFYRECDISGTIDYIFG 199
TFEN AGPEKHQAVALRINADL+A+Y C + GYQDTLY HSFRQFYRECDI GTID+IFG
Sbjct: 628 TFENRAGPEKHQAVALRINADLAAVYKCTILGYQDTLYVHSFRQFYRECDIFGTIDFIFG 687
Query: 198 NGVVVFQGCNIISRLPLPGQFNAITAQSRDIAEEDTGFSIQNCSILASEELYANKMSVKS 19
N VVFQ CNI++R+P+ GQF +TAQSRD ++EDTG SIQNCSI A+++LY+N+ SVKS
Sbjct: 688 NAAVVFQACNIVARMPMAGQFTVVTAQSRDTSDEDTGISIQNCSISATDDLYSNRGSVKS 747
Query: 18 YLGRPW 1
YLGRPW
Sbjct: 748 YLGRPW 753
Score = 146 bits (368), Expect = 2e-33
Identities = 70/126 (55%), Positives = 87/126 (69%)
Frame = -1
Query: 378 TFENTAGPEKHQAVALRINADLSAIYHCVVNGYQDTLYPHSFRQFYRECDISGTIDYIFG 199
TF+NTAGP KHQAVALR+ +DLSA Y C V YQDTLY HS RQF+ C ++GT+D+IFG
Sbjct: 19 TFQNTAGPSKHQAVALRVGSDLSAFYRCDVLAYQDTLYVHSLRQFFVGCLVAGTVDFIFG 78
Query: 198 NGVVVFQGCNIISRLPLPGQFNAITAQSRDIAEEDTGFSIQNCSILASEELYANKMSVKS 19
N V Q C+I +R P GQ N +TAQ RD ++TG IQ C I A+ +L + S +
Sbjct: 79 NAAAVLQDCDIHARRPNSGQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLKPVQSSFPT 138
Query: 18 YLGRPW 1
YLGRPW
Sbjct: 139 YLGRPW 144
Score = 145 bits (365), Expect = 4e-33
Identities = 68/125 (54%), Positives = 85/125 (68%)
Frame = -1
Query: 375 FENTAGPEKHQAVALRINADLSAIYHCVVNGYQDTLYPHSFRQFYRECDISGTIDYIFGN 196
F NTAGPEKHQAVA+R+ +D S +C ++GYQDT+Y + RQF+R C I+GTID+IFG+
Sbjct: 1237 FRNTAGPEKHQAVAIRVQSDRSIFLNCRMDGYQDTVYAQTHRQFFRGCVITGTIDFIFGD 1296
Query: 195 GVVVFQGCNIISRLPLPGQFNAITAQSRDIAEEDTGFSIQNCSILASEELYANKMSVKSY 16
+FQ C I R PL Q N +TAQ R E TG +QNC IL ++L K VKSY
Sbjct: 1297 ASAIFQNCLITVRKPLDNQQNIVTAQGRTDKRETTGIVLQNCRILPDQDLIPTKTQVKSY 1356
Query: 15 LGRPW 1
LGRPW
Sbjct: 1357 LGRPW 1361
>ref|XP_002878961.1| pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297324800|gb|EFH55220.1| pectinesterase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 542
Score = 206 bits (524), Expect = 2e-51
Identities = 93/123 (75%), Positives = 107/123 (86%)
Frame = -1
Query: 369 NTAGPEKHQAVALRINADLSAIYHCVVNGYQDTLYPHSFRQFYRECDISGTIDYIFGNGV 190
NTAGPEKHQAVALR+NAD A+Y CV++GYQDTLY HSFRQFYRECDI GTIDYIFGN
Sbjct: 329 NTAGPEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAA 388
Query: 189 VVFQGCNIISRLPLPGQFNAITAQSRDIAEEDTGFSIQNCSILASEELYANKMSVKSYLG 10
VVFQGCNI+S+LP+PGQF +TAQSRD +EDTG S+QNCSILAS++L+ + VKSYLG
Sbjct: 389 VVFQGCNIVSKLPMPGQFTVVTAQSRDSPDEDTGISMQNCSILASDDLFNSSNRVKSYLG 448
Query: 9 RPW 1
RPW
Sbjct: 449 RPW 451