BLASTX nr result

ID: Coptis21_contig00032009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032009
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511782.1| conserved hypothetical protein [Ricinus comm...   247   8e-64
ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267...   246   2e-63
emb|CBI28665.3| unnamed protein product [Vitis vinifera]              246   2e-63
ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|2...   240   1e-61
ref|XP_002892037.1| SET domain-containing protein [Arabidopsis l...   233   2e-59

>ref|XP_002511782.1| conserved hypothetical protein [Ricinus communis]
           gi|223548962|gb|EEF50451.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 446

 Score =  247 bits (631), Expect = 8e-64
 Identities = 120/186 (64%), Positives = 145/186 (77%), Gaps = 1/186 (0%)
 Frame = -3

Query: 555 FLWANSIFWTRALNIPFPHSYVFPQAVEDKED-CPSFGKDPDASRMCGEVSSSLKDEKVG 379
           FLWANS+FW+RALNIP PHSYVFPQ  ED+E+ C +   +   +        + KDE+  
Sbjct: 64  FLWANSLFWSRALNIPLPHSYVFPQVEEDQENHCSTIDSELSYNDNSAGDLINEKDERT- 122

Query: 378 NRSDVASNSMHGESIWVEGLVPGIDFCNHGLKAAATWEVDGSGSTTGVPASMYLLSAEKS 199
                   S  GE++WVEGLVPGIDFCNH LKAAATWEVDG+G  TGVP+SMYLLSAE++
Sbjct: 123 -----TCTSSQGETVWVEGLVPGIDFCNHDLKAAATWEVDGTGLVTGVPSSMYLLSAEQT 177

Query: 198 PFQIEKEVYISYGNKGNEELLYLYGFVIDNNPDDYLMVHYPIEAFQSLPFADTKGRLLEI 19
           P + EKE++ISYGNKGNEELLYLYGFVIDNN DDYLMV+YP+EA Q++PF+D+K +LLE 
Sbjct: 178 PIKTEKEIFISYGNKGNEELLYLYGFVIDNNTDDYLMVNYPVEAIQNVPFSDSKMQLLEA 237

Query: 18  QKAEMR 1
           QKAEMR
Sbjct: 238 QKAEMR 243


>ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267311 [Vitis vinifera]
          Length = 561

 Score =  246 bits (627), Expect = 2e-63
 Identities = 129/197 (65%), Positives = 149/197 (75%), Gaps = 12/197 (6%)
 Frame = -3

Query: 555 FLWANSIFWTRALNIPFPHSYVFPQAVEDKEDC-PSFGKDPDASRMCGEVSS----SLKD 391
           FLWANSIFWTRALNIP P SYVFPQ  E++  C P+  KD  A     ++SS    S  D
Sbjct: 176 FLWANSIFWTRALNIPLPRSYVFPQIQEEQNSCIPNIIKDSGA--FTDQISSGNLVSGMD 233

Query: 390 EKV----GNRSDV---ASNSMHGESIWVEGLVPGIDFCNHGLKAAATWEVDGSGSTTGVP 232
           EK     G  S V    S+SM  E +WVEGLVPGIDFCNH LKAAATWEVD +G  TGVP
Sbjct: 234 EKSTDVHGFESQVNRGTSSSMQEEILWVEGLVPGIDFCNHDLKAAATWEVDNTGLKTGVP 293

Query: 231 ASMYLLSAEKSPFQIEKEVYISYGNKGNEELLYLYGFVIDNNPDDYLMVHYPIEAFQSLP 52
            SMYLLS E+SP  ++KE+ ISYGNKGNEELLYLYGFVIDNNPDDYLMVHYP+E F+++P
Sbjct: 294 LSMYLLSVEQSPCHMQKEISISYGNKGNEELLYLYGFVIDNNPDDYLMVHYPMELFKNVP 353

Query: 51  FADTKGRLLEIQKAEMR 1
           F+++KG+LLE QKAEMR
Sbjct: 354 FSESKGQLLEAQKAEMR 370


>emb|CBI28665.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score =  246 bits (627), Expect = 2e-63
 Identities = 129/197 (65%), Positives = 149/197 (75%), Gaps = 12/197 (6%)
 Frame = -3

Query: 555 FLWANSIFWTRALNIPFPHSYVFPQAVEDKEDC-PSFGKDPDASRMCGEVSS----SLKD 391
           FLWANSIFWTRALNIP P SYVFPQ  E++  C P+  KD  A     ++SS    S  D
Sbjct: 176 FLWANSIFWTRALNIPLPRSYVFPQIQEEQNSCIPNIIKDSGA--FTDQISSGNLVSGMD 233

Query: 390 EKV----GNRSDV---ASNSMHGESIWVEGLVPGIDFCNHGLKAAATWEVDGSGSTTGVP 232
           EK     G  S V    S+SM  E +WVEGLVPGIDFCNH LKAAATWEVD +G  TGVP
Sbjct: 234 EKSTDVHGFESQVNRGTSSSMQEEILWVEGLVPGIDFCNHDLKAAATWEVDNTGLKTGVP 293

Query: 231 ASMYLLSAEKSPFQIEKEVYISYGNKGNEELLYLYGFVIDNNPDDYLMVHYPIEAFQSLP 52
            SMYLLS E+SP  ++KE+ ISYGNKGNEELLYLYGFVIDNNPDDYLMVHYP+E F+++P
Sbjct: 294 LSMYLLSVEQSPCHMQKEISISYGNKGNEELLYLYGFVIDNNPDDYLMVHYPMELFKNVP 353

Query: 51  FADTKGRLLEIQKAEMR 1
           F+++KG+LLE QKAEMR
Sbjct: 354 FSESKGQLLEAQKAEMR 370


>ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|222861544|gb|EEE99086.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score =  240 bits (612), Expect = 1e-61
 Identities = 124/207 (59%), Positives = 142/207 (68%), Gaps = 22/207 (10%)
 Frame = -3

Query: 555 FLWANSIFWTRALNIPFPHSYVFPQAVEDKEDCPSFGKDPDASRMCGEVSSSLKDEKVGN 376
           FLWANS+FWTRALNIP P SYVFPQ  ED++   S   D   S     + S  K   V  
Sbjct: 161 FLWANSVFWTRALNIPLPRSYVFPQVQEDQDSQSSLNIDSGVSHTKALLISGSKVPGVDG 220

Query: 375 RSDVASNSMHGESIWVEGLVPGIDFCNHGLKAAATWEVDGSGSTTGVPASMYLLSAEKSP 196
           + D        E++WVEGLVPGIDFCNH LKA ATWEVDG+G TTGVP SMYLLSAEK+P
Sbjct: 221 QFD--------ETVWVEGLVPGIDFCNHDLKAVATWEVDGTGMTTGVPHSMYLLSAEKTP 272

Query: 195 FQIEKEVYISYGNKGNEELLYLYGFVIDNNPDDYLM----------------------VH 82
           FQ+EKE+ ISYGNKGNEELLYLYGFVIDNNPD+YLM                      VH
Sbjct: 273 FQMEKEITISYGNKGNEELLYLYGFVIDNNPDEYLMVMPLFGFCNSDVVLLGQYFLLDVH 332

Query: 81  YPIEAFQSLPFADTKGRLLEIQKAEMR 1
           YP+EA Q++PF+D+K +LLE QKAEMR
Sbjct: 333 YPVEAIQNVPFSDSKMQLLEAQKAEMR 359


>ref|XP_002892037.1| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337879|gb|EFH68296.1| SET domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 548

 Score =  233 bits (593), Expect = 2e-59
 Identities = 114/185 (61%), Positives = 139/185 (75%)
 Frame = -3

Query: 555 FLWANSIFWTRALNIPFPHSYVFPQAVEDKEDCPSFGKDPDASRMCGEVSSSLKDEKVGN 376
           FLWANS+FW+RALNIP PHS+VFPQ+ +D  +CPS    P+ +     V+S+   E+ GN
Sbjct: 179 FLWANSVFWSRALNIPLPHSFVFPQSQDDIGECPSTSHSPETA----PVNSN---EEKGN 231

Query: 375 RSDVASNSMHGESIWVEGLVPGIDFCNHGLKAAATWEVDGSGSTTGVPASMYLLSAEKSP 196
            +   +    G++IWVEGLVPGIDFCNH LK  ATWEVDG+GS + VP SMYLLSA    
Sbjct: 232 LACNYNFMRSGDTIWVEGLVPGIDFCNHDLKPMATWEVDGTGSVSRVPFSMYLLSAVAQR 291

Query: 195 FQIEKEVYISYGNKGNEELLYLYGFVIDNNPDDYLMVHYPIEAFQSLPFADTKGRLLEIQ 16
               KE+ ISYGNKGNEELLYLYGFVIDNNPDDYLMVHYP+EA   +PF+D+KG+LLE Q
Sbjct: 292 LIPNKEISISYGNKGNEELLYLYGFVIDNNPDDYLMVHYPVEAIPIIPFSDSKGQLLEAQ 351

Query: 15  KAEMR 1
            A++R
Sbjct: 352 NAQLR 356


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