BLASTX nr result

ID: Coptis21_contig00032005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032005
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36614.3| unnamed protein product [Vitis vinifera]              169   2e-40
emb|CAN81813.1| hypothetical protein VITISV_020894 [Vitis vinifera]   167   6e-40
ref|XP_002325094.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37
emb|CBI36603.3| unnamed protein product [Vitis vinifera]              155   2e-36
emb|CAN67054.1| hypothetical protein VITISV_035706 [Vitis vinifera]   154   9e-36

>emb|CBI36614.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  169 bits (429), Expect = 2e-40
 Identities = 81/146 (55%), Positives = 98/146 (67%), Gaps = 6/146 (4%)
 Frame = -1

Query: 422 MSSDYKLTVPQSPVEPMDFLSREWCKSTLQVFHPSALDQTVVLRDYPHKASANDVKAPLP 243
           M  D+K T+ ++  E MDFLSR WC   +Q   P   DQ+VV+ D P K   ND KAP P
Sbjct: 1   MDPDFKPTISEAHPETMDFLSRAWCNFAVQAIQPELQDQSVVILDNPIKKFGNDTKAPFP 60

Query: 242 KMDRSTNMD------VPPWIGKDIKSWIWLQQAMHPEINYHSCFRKKLFPWKMTTPFKNM 81
           KMD S  MD       PPW   D+KSWIW+QQAMHPE+NY+S FRKK   WK+     N+
Sbjct: 61  KMDNSVKMDDAGIKSPPPWKTNDVKSWIWMQQAMHPELNYNSYFRKKWISWKIMPLGSNI 120

Query: 80  SLKKWFKEIRQKRKEEDRLQRAEVHA 3
           S+KKWFK+I+ KRKEEDRLQRAEV+A
Sbjct: 121 SIKKWFKDIKLKRKEEDRLQRAEVYA 146


>emb|CAN81813.1| hypothetical protein VITISV_020894 [Vitis vinifera]
          Length = 417

 Score =  167 bits (424), Expect = 6e-40
 Identities = 80/146 (54%), Positives = 98/146 (67%), Gaps = 6/146 (4%)
 Frame = -1

Query: 422 MSSDYKLTVPQSPVEPMDFLSREWCKSTLQVFHPSALDQTVVLRDYPHKASANDVKAPLP 243
           M  D+K T+ ++  E MDFLSR WC   +Q   P   DQ+VV+ D P K   ND KAP P
Sbjct: 26  MDPDFKPTISEAHPETMDFLSRAWCNFAVQAIQPELQDQSVVILDNPIKKFGNDTKAPFP 85

Query: 242 KMDRSTNMD------VPPWIGKDIKSWIWLQQAMHPEINYHSCFRKKLFPWKMTTPFKNM 81
           K+D S  MD       PPW   D+KSWIW+QQAMHPE+NY+S FRKK   WK+     N+
Sbjct: 86  KIDNSVKMDDAGIKSPPPWKTNDVKSWIWMQQAMHPELNYNSHFRKKWISWKIMPLGSNI 145

Query: 80  SLKKWFKEIRQKRKEEDRLQRAEVHA 3
           S+KKWFK+I+ KRKEEDRLQRAEV+A
Sbjct: 146 SIKKWFKDIKLKRKEEDRLQRAEVYA 171


>ref|XP_002325094.1| predicted protein [Populus trichocarpa] gi|222866528|gb|EEF03659.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  158 bits (400), Expect = 4e-37
 Identities = 80/150 (53%), Positives = 98/150 (65%), Gaps = 10/150 (6%)
 Frame = -1

Query: 422 MSSDYKLTVPQSPVEPMDFLSREWCKSTLQVFHPSALDQTVVLRDYPHKASANDV-KAPL 246
           M S  K +  ++  E MDFLS  WC   +Q   P   +Q ++L D P K    DV K P 
Sbjct: 1   MDSIMKPSPSEAHPETMDFLSSTWCNFAVQALQPDLQNQPIILLDNPIKKLDCDVMKPPF 60

Query: 245 PKMDRSTNMD-----VPPWIGKDIKSWIWLQQAMHPEINYHSCFRKK----LFPWKMTTP 93
            KMD+S  MD     +PPW   D+KSWIW+QQAMHPE+NY+SCFRKK    LFPWK   P
Sbjct: 61  SKMDKSVKMDDAFKSLPPWKSNDMKSWIWMQQAMHPELNYNSCFRKKWVHNLFPWKNILP 120

Query: 92  FKNMSLKKWFKEIRQKRKEEDRLQRAEVHA 3
           FK +S+KKW KEI+ KRKEE+RLQ+AEVHA
Sbjct: 121 FKTISIKKWLKEIKLKRKEEERLQKAEVHA 150


>emb|CBI36603.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  155 bits (393), Expect = 2e-36
 Identities = 75/146 (51%), Positives = 95/146 (65%), Gaps = 6/146 (4%)
 Frame = -1

Query: 422 MSSDYKLTVPQSPVEPMDFLSREWCKSTLQVFHPSALDQTVVLRDYPHKASANDVKAPLP 243
           M  D+K T+ ++  E MDFLS  WC   +Q   P   DQ++V+ D P K    D KAP P
Sbjct: 1   MEPDFKPTISEAHPETMDFLSPAWCNFAVQAIQPELQDQSLVILDNPIKKFGYDTKAPFP 60

Query: 242 KMDRSTNMD------VPPWIGKDIKSWIWLQQAMHPEINYHSCFRKKLFPWKMTTPFKNM 81
           KMD+S  +D       P W   D+KSWIW+QQAMHPE+NY+S FRKK   WK+     ++
Sbjct: 61  KMDQSVKVDDAGIKSPPAWKPNDVKSWIWMQQAMHPELNYNSYFRKKWLSWKIMPFGSSV 120

Query: 80  SLKKWFKEIRQKRKEEDRLQRAEVHA 3
           S+KKWFK+I+ KRKEE RLQRAEVHA
Sbjct: 121 SIKKWFKDIKLKRKEEGRLQRAEVHA 146


>emb|CAN67054.1| hypothetical protein VITISV_035706 [Vitis vinifera]
          Length = 392

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/146 (50%), Positives = 94/146 (64%), Gaps = 6/146 (4%)
 Frame = -1

Query: 422 MSSDYKLTVPQSPVEPMDFLSREWCKSTLQVFHPSALDQTVVLRDYPHKASANDVKAPLP 243
           M  D+K T+ ++  E MDFLS  WC   +Q   P   DQ++V+ D P K    D K P P
Sbjct: 1   MEPDFKPTISEAHPETMDFLSPAWCNFAVQAIQPELQDQSLVILDNPIKKFGYDTKXPFP 60

Query: 242 KMDRSTNMD------VPPWIGKDIKSWIWLQQAMHPEINYHSCFRKKLFPWKMTTPFKNM 81
           KMD+S  +D       P W   D+KSWIW+QQAMHPE+NY+S FRKK   WK+     ++
Sbjct: 61  KMDQSVKVDDAGIKSPPXWKPNDVKSWIWMQQAMHPELNYNSYFRKKWLSWKIMPFGSSV 120

Query: 80  SLKKWFKEIRQKRKEEDRLQRAEVHA 3
           S+KKWFK+I+ KRKEE RLQRAEVHA
Sbjct: 121 SIKKWFKDIKLKRKEEGRLQRAEVHA 146


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