BLASTX nr result

ID: Coptis21_contig00032003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032003
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]   134   8e-30
gb|AAV32822.1| transposase [Zea mays]                                 125   4e-27
gb|ABD32595.1| HAT dimerisation [Medicago truncatula]                 124   6e-27
gb|ADN33674.1| transposase [Cucumis melo subsp. melo]                 118   6e-25
gb|ACX85638.1| putative transposase [Cucumis melo]                    118   6e-25

>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/107 (58%), Positives = 87/107 (81%)
 Frame = +1

Query: 7   NKSEVERFLAETNEVGGDKFDILGWWKINASRYRILSLVTRDVLAVPISSVASESAFSTG 186
           +KSE++ +L+E+NE   D FDIL WWK+N S++++L+ + +DVLA+PIS+VA ES FSTG
Sbjct: 444 SKSELDWYLSESNERVDDGFDILHWWKVNCSKFKVLAQIAKDVLAIPISTVAFESKFSTG 503

Query: 187 GRILDSFRSSLAPNTVEALICAQDWLRSPSIPINLRQSMDDIEQYDK 327
           GRILD FRSSL+P TVE LIC Q+ LRS  IPINLR++M++IE  ++
Sbjct: 504 GRILDPFRSSLSPKTVEMLICGQNRLRSSPIPINLRETMEEIENLEQ 550


>gb|AAV32822.1| transposase [Zea mays]
          Length = 674

 Score =  125 bits (314), Expect = 4e-27
 Identities = 66/114 (57%), Positives = 86/114 (75%)
 Frame = +1

Query: 4   SNKSEVERFLAETNEVGGDKFDILGWWKINASRYRILSLVTRDVLAVPISSVASESAFST 183
           +NKSE++++LAE  E    K D+L WWK +  R+ ILS + RDVLA+PISSVASESAFST
Sbjct: 533 NNKSELDKYLAEETEDTEMKLDLLVWWKASEQRFPILSRLARDVLAIPISSVASESAFST 592

Query: 184 GGRILDSFRSSLAPNTVEALICAQDWLRSPSIPINLRQSMDDIEQYDKLDGELF 345
           GGRILD FRSSL P  +E+L+C QDWLR  +IPI++    ++IE+  KL+ ELF
Sbjct: 593 GGRILDDFRSSLTPFMLESLVCTQDWLRW-TIPIDI---TENIEELTKLEEELF 642


>gb|ABD32595.1| HAT dimerisation [Medicago truncatula]
          Length = 132

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/112 (51%), Positives = 87/112 (77%)
 Frame = +1

Query: 7   NKSEVERFLAETNEVGGDKFDILGWWKINASRYRILSLVTRDVLAVPISSVASESAFSTG 186
           +++EV+ +L+E+ E     FDIL WWK+N+++Y    L++RD+LA+PIS+VASESAFSTG
Sbjct: 8   SQTEVDIYLSESREKKNPDFDILNWWKVNSTKYPTHGLISRDILAMPISTVASESAFSTG 67

Query: 187 GRILDSFRSSLAPNTVEALICAQDWLRSPSIPINLRQSMDDIEQYDKLDGEL 342
           GR+L  +RSSL  +TVEALICAQ+WLRS  + +++ + ++D+E   KL+ EL
Sbjct: 68  GRVLSCYRSSLTTHTVEALICAQNWLRSSPLSVDIEEQLEDLE---KLEEEL 116


>gb|ADN33674.1| transposase [Cucumis melo subsp. melo]
          Length = 347

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/108 (52%), Positives = 81/108 (75%), Gaps = 2/108 (1%)
 Frame = +1

Query: 10  KSEVERFLAETNE--VGGDKFDILGWWKINASRYRILSLVTRDVLAVPISSVASESAFST 183
           K+EV R+L E     +G +  D+L WWK+NASR++I+S V RD+ ++PIS+V SESAFST
Sbjct: 232 KTEVTRYLDEARIDCMGDEYLDLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFST 291

Query: 184 GGRILDSFRSSLAPNTVEALICAQDWLRSPSIPINLRQSMDDIEQYDK 327
           GGR+LDSFRSSL P T EALICAQ+W++S  +  ++ + +D  E+ D+
Sbjct: 292 GGRVLDSFRSSLTPQTAEALICAQNWIQSKPLD-DMTEEIDGAEEIDE 338


>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/108 (52%), Positives = 81/108 (75%), Gaps = 2/108 (1%)
 Frame = +1

Query: 10  KSEVERFLAETNE--VGGDKFDILGWWKINASRYRILSLVTRDVLAVPISSVASESAFST 183
           K+EV R+L E     +G +  D+L WWK+NASR++I+S V RD+ ++PIS+V SESAFST
Sbjct: 565 KTEVTRYLDEARIDCMGDEYLDLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFST 624

Query: 184 GGRILDSFRSSLAPNTVEALICAQDWLRSPSIPINLRQSMDDIEQYDK 327
           GGR+LDSFRSSL P T EALICAQ+W++S  +  ++ + +D  E+ D+
Sbjct: 625 GGRVLDSFRSSLTPQTAEALICAQNWIQSKPLD-DMTEEIDGAEEIDE 671


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