BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031909
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...    85   5e-15
ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...    82   6e-14
ref|XP_003593892.1| F-box protein SKIP19 [Medicago truncatula] g...    77   2e-12
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...    72   4e-11
ref|XP_004158685.1| PREDICTED: putative F-box/LRR-repeat protein...    72   5e-11

>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
 Frame = +2

Query: 83  GERNWLDMPHDIMLLIFSKLDVVQLLFYAQHVCTLWQQLAKDPSLYRSLAFPKWCIRDH- 259
           GERNWLD+P D +L IF KLD + LL  A +VCT W++++KDP L+R++  P     D+ 
Sbjct: 20  GERNWLDLPRDAVLSIFRKLDAIDLLVRAHNVCTTWRKISKDPFLFRTINMPNLGEPDYQ 79

Query: 260 -NIHRTVKEAVKRSCGQLIEISLEEPWCMRMNLHHVVEKSGKSLKSLRLA 406
            ++    + AV  SCG +I+I++E  +    +L H +  S   L+ LRLA
Sbjct: 80  LDLETLCQRAVDYSCGHIIDINIE--YFGTDDLLHRIANSASHLQRLRLA 127


>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
 Frame = +2

Query: 89  RNWLDMPHDIMLLIFSKLDVVQLLFYAQHVCTLWQQLAKDPSLYR--SLAFP-KWCIRDH 259
           RNWL++P D+  +I  KL  V++L YAQ+VC+ W+++ +DP ++R   + +P  W   D+
Sbjct: 15  RNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWDMDY 74

Query: 260 NIHRTVKEAVKRSCGQLIEISLEEPWCMRMNLHHVVEKSGKSLKSLRLACINKFT 424
           N+    ++AVKRSCGQLI  ++E      + L+  + +S   L  LRL   N+ +
Sbjct: 75  NLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLY--ITQSCNQLSRLRLVYCNRIS 127


>ref|XP_003593892.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482940|gb|AES64143.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 308

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
 Frame = +2

Query: 83  GERNWLDMPHDIMLLIFSKLDVVQLLFYAQHVCTLWQQLAKDPSLYRSLAFP-------K 241
           GERNW+D+P D +L IF KLD + +L    +VCT+W++++KD SLYR++  P       K
Sbjct: 24  GERNWVDLPRDSVLSIFRKLDSIDILIRPYNVCTIWREISKDHSLYRTINMPNSADPNTK 83

Query: 242 WCIRDHNIHRTVKEAVKRSCGQLIEISLEEPWCMRMNLHHVVEKSGKSLKSLRL 403
           W      +      AV  S G +I I++E  +     LHH+     + L+ LRL
Sbjct: 84  W-----ELLNLCYRAVDYSFGHIIHINIEN-FATDALLHHITNSYARHLQRLRL 131


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
 Frame = +2

Query: 83  GERNWLDMPHDIMLLIFSKLDVVQLLFYAQHVCTLWQQLAKDPSLYRSLAFPKW---CIR 253
           GERNWLD+P D++L IF KL  + LL  A +VCT W++++KDP LY ++  P        
Sbjct: 21  GERNWLDLPSDVVLTIFRKLHTIDLLHRAHNVCTTWRKISKDPFLYHTIDMPNIGTDLSS 80

Query: 254 DHNIHRTVKEAVKRSCGQLIEISLEEPWCMRMNLHHVVEKSGKSLKSLRLACIN 415
           D  +    + AV  S GQ  +I++E      + L H+ + +    +   L C N
Sbjct: 81  DFYLEILCQRAVDYSSGQATDINIEYFGTDDL-LRHIADSANHLQRLRLLGCYN 133


>ref|XP_004158685.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 273

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
 Frame = +2

Query: 89  RNWLDMPHDIMLLIFSKLDVVQLLFYAQHVCTLWQQLAKDPSLYRSLAFPKWCIRDHNIH 268
           RNWL++P +++ +I  KL  +++L  AQ+VC+LW ++ KDP L+R +        +   H
Sbjct: 10  RNWLELPAEVIFVILHKLGAIEILTTAQNVCSLWYKICKDPFLWRVIDMHNSGDLNSFDH 69

Query: 269 RTV--KEAVKRSCGQLIEISLEEPWCMRMNLHHVVEKSGKSLKSLRL 403
             +  K AV RSCGQL+EI++E      + L+  +  S K ++ LRL
Sbjct: 70  LEIMCKHAVDRSCGQLVEINIEHFGSDELLLY--IANSSKQVRRLRL 114