BLASTX nr result

ID: Coptis21_contig00031892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031892
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634908.1| PREDICTED: putative disease resistance prote...    98   8e-19
ref|XP_002297736.1| cc-nbs-lrr resistance protein [Populus trich...    95   5e-18
gb|ABF81420.1| NBS type disease resistance protein [Populus tric...    95   5e-18
ref|XP_002269571.2| PREDICTED: putative disease resistance prote...    94   1e-17
ref|XP_003632438.1| PREDICTED: putative disease resistance prote...    94   2e-17

>ref|XP_003634908.1| PREDICTED: putative disease resistance protein At3g14460-like [Vitis
            vinifera]
          Length = 1280

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 62/142 (43%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
 Frame = +2

Query: 5    SITKLQSLETLALL-CSKITLLPGEIWKLQKLEHICLHKDTVLTYMPSGLSHLTSIRTLE 181
            SIT L +L+TL L  C  +T LP E+ KL  L+H+ +  +T+L  MP G+  L  +RTL 
Sbjct: 633  SITNLFNLQTLMLSNCISLTHLPTEMGKLINLQHLDI-TNTILKEMPMGMKGLKRLRTLT 691

Query: 182  *FFVGKGIGCKLNELNGLIHLKGMLRIFNLENVSSARDCVEANLKGKPNLIRLKLVWNDE 361
             F VG+  G K+ EL  + HL G L I  L+NV  A D  EANLKGK  L  L + W+ E
Sbjct: 692  AFVVGEDRGAKIKELRDMSHLGGRLCISKLQNVVDAMDVFEANLKGKERLDELVMQWDGE 751

Query: 362  GANR-VKIDFDVLGNLEPHRNL 424
               R ++ +  VL  L+PH NL
Sbjct: 752  ATARDLQKETTVLEKLQPHNNL 773


>ref|XP_002297736.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844994|gb|EEE82541.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1123

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 61/142 (42%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2    NSITKLQSLETLALL-CSKITLLPGEIWKLQKLEHICLHKDTVLTYMPSGLSHLTSIRTL 178
            +S++ L +L+TL L  C  +  LP  + KL  L H+ + K T L  MPS LS LT +  L
Sbjct: 616  DSVSTLYNLQTLILHECKDLIELPTSMMKLINLCHLDITK-TKLQAMPSQLSKLTKLLKL 674

Query: 179  E*FFVGKGIGCKLNELNGLIHLKGMLRIFNLENVSSARDCVEANLKGKPNLIRLKLVWND 358
              FF+GK  G  +NEL  L HL+G LRI+NL+NV  A++ ++ANLKGK  L  L+L W  
Sbjct: 675  TDFFLGKQSGSSINELGKLQHLRGTLRIWNLQNVMDAQNAIKANLKGKQLLKELELTWKG 734

Query: 359  EGANRVKIDFDVLGNLEPHRNL 424
            +  N    +  VL  L+PH N+
Sbjct: 735  D-TNDSLHERLVLEQLQPHMNI 755


>gb|ABF81420.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 1234

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 61/142 (42%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2    NSITKLQSLETLALL-CSKITLLPGEIWKLQKLEHICLHKDTVLTYMPSGLSHLTSIRTL 178
            +S++ L +L+TL L  C  +  LP  + KL  L H+ + K T L  MPS LS LT +  L
Sbjct: 595  DSVSTLYNLQTLILHECKDLIELPTSMMKLINLCHLDITK-TKLQAMPSQLSKLTKLLKL 653

Query: 179  E*FFVGKGIGCKLNELNGLIHLKGMLRIFNLENVSSARDCVEANLKGKPNLIRLKLVWND 358
              FF+GK  G  +NEL  L HL+G LRI+NL+NV  A++ ++ANLKGK  L  L+L W  
Sbjct: 654  TDFFLGKQSGSSINELGKLQHLRGTLRIWNLQNVMDAQNAIKANLKGKQLLKELELTWKG 713

Query: 359  EGANRVKIDFDVLGNLEPHRNL 424
            +  N    +  VL  L+PH N+
Sbjct: 714  D-TNDSLHERLVLEQLQPHMNI 734


>ref|XP_002269571.2| PREDICTED: putative disease resistance protein At3g14460-like [Vitis
            vinifera]
          Length = 1330

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 61/142 (42%), Positives = 81/142 (57%), Gaps = 2/142 (1%)
 Frame = +2

Query: 5    SITKLQSLETLALL-CSKITLLPGEIWKLQKLEHICLHKDTVLTYMPSGLSHLTSIRTLE 181
            SIT L +L+TL L  C  +T LP ++ KL  L H+ +  DT L  MP G+  L  +RTL 
Sbjct: 633  SITNLFNLQTLMLSNCHSLTHLPTKMGKLINLRHLDI-SDTSLKEMPMGMEGLKRLRTLT 691

Query: 182  *FFVGKGIGCKLNELNGLIHLKGMLRIFNLENVSSARDCVEANLKGKPNLIRLKLVWN-D 358
             F VG+  G K+ EL  + HL G L I  L+NV  A D  EAN+KGK  L  L + W+ D
Sbjct: 692  AFAVGEDRGAKIKELREMSHLGGRLCISKLQNVVDAMDVFEANMKGKERLDELVMQWDGD 751

Query: 359  EGANRVKIDFDVLGNLEPHRNL 424
              A  ++ +  VL  L+PH NL
Sbjct: 752  ATARDLQKETTVLEKLQPHNNL 773


>ref|XP_003632438.1| PREDICTED: putative disease resistance protein At3g14460-like
           [Vitis vinifera]
          Length = 966

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 60/143 (41%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
 Frame = +2

Query: 5   SITKLQSLETLALL-CSKITLLPGEIWKLQKLEHICLHKDTVLTYMPSGLSHLTSIRTLE 181
           SIT L +L+TL L  C  +  LP ++ +L  L H+ ++  T L  MP  +S + ++RTL 
Sbjct: 547 SITTLFNLQTLMLSECRYLVDLPTKMGRLINLRHLKIN-GTNLERMPIEMSRMKNLRTLT 605

Query: 182 *FFVGKGIGCKLNELNGLIHLKGMLRIFNLENVSSARDCVEANLKGKPNLIRLKLVWNDE 361
            F VGK  G ++ EL  L HL G L IF L+NV+ ARD +E+N+KGK  L +L+L W D+
Sbjct: 606 TFVVGKHTGSRVGELRDLSHLSGTLAIFKLKNVADARDALESNMKGKECLDKLELNWEDD 665

Query: 362 G--ANRVKIDFDVLGNLEPHRNL 424
              A        VL  L+PH NL
Sbjct: 666 NAIAGDSHDAASVLEKLQPHSNL 688


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