BLASTX nr result

ID: Coptis21_contig00031792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031792
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265369.1| PREDICTED: SNF1-related protein kinase regul...   100   1e-19
emb|CAN64662.1| hypothetical protein VITISV_035347 [Vitis vinifera]   100   2e-19
gb|AAA91175.1| Pv42p [Phaseolus vulgaris]                              96   3e-18
ref|XP_003597910.1| SNF4b [Medicago truncatula] gi|355486958|gb|...    95   7e-18
gb|AAO61675.1| SNF4b [Medicago truncatula]                             95   7e-18

>ref|XP_002265369.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           gamma-like PV42a [Vitis vinifera]
           gi|297743469|emb|CBI36336.3| unnamed protein product
           [Vitis vinifera]
          Length = 361

 Score =  100 bits (249), Expect = 1e-19
 Identities = 56/110 (50%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
 Frame = -1

Query: 410 GKGRKLIGTFSATDLRGCPISLLQSWLYISVLEFTEKHQPGRLTDSSIGHSS-RELVTCW 234
           GKGRKLIGTFSATDLRGCP++ LQSWL +SV++FTEK     L  S+   S  RELVTC+
Sbjct: 249 GKGRKLIGTFSATDLRGCPVTQLQSWLPLSVMDFTEKVSTSPLHGSTNSRSPWRELVTCF 308

Query: 233 KHTSLAEXXXXXXXXXXXXXXXXNEQGLLVGIVSLTDMLRVIRSLLLFES 84
             + L E                + QG LVG+VSLTDM+R +R  LL ++
Sbjct: 309 AESCLGEAIDKAVAKHVHRVWVVDRQGSLVGLVSLTDMIRAVRISLLSDA 358


>emb|CAN64662.1| hypothetical protein VITISV_035347 [Vitis vinifera]
          Length = 361

 Score =  100 bits (248), Expect = 2e-19
 Identities = 56/110 (50%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
 Frame = -1

Query: 410 GKGRKLIGTFSATDLRGCPISLLQSWLYISVLEFTEKHQPGRLTDSSIGHSS-RELVTCW 234
           GKGRKLIGTFSATDLRGCP++ LQSWL +SV++FTEK     L  S+   S  RELVTC+
Sbjct: 249 GKGRKLIGTFSATDLRGCPVTQLQSWLPLSVMDFTEKVTTSPLHGSTNSRSPWRELVTCF 308

Query: 233 KHTSLAEXXXXXXXXXXXXXXXXNEQGLLVGIVSLTDMLRVIRSLLLFES 84
             + L E                + QG LVG+VSLTDM+R +R  LL ++
Sbjct: 309 AESCLGEAIDKAVAKHVHRVWVVDRQGSLVGLVSLTDMIRAVRISLLSDA 358


>gb|AAA91175.1| Pv42p [Phaseolus vulgaris]
          Length = 379

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 57/113 (50%), Positives = 71/113 (62%), Gaps = 4/113 (3%)
 Frame = -1

Query: 410 GKGRKLIGTFSATDLRGCPISLLQSWLYISVLEFTEKHQPGRLTDSS----IGHSSRELV 243
           G+ RKLIGTFSATDLRGC IS L+SWL IS L FTE+ +   L   S     G S RELV
Sbjct: 264 GRCRKLIGTFSATDLRGCHISSLKSWLGISALAFTEEVRSSPLYSESDMQNRGSSRRELV 323

Query: 242 TCWKHTSLAEXXXXXXXXXXXXXXXXNEQGLLVGIVSLTDMLRVIRSLLLFES 84
           TC+  + L+E                +++GLLVG+VSLTD++RVIR  LL +S
Sbjct: 324 TCYAESPLSEVIEKAVTSHVHRVWVVDQEGLLVGVVSLTDVIRVIRHSLLSDS 376


>ref|XP_003597910.1| SNF4b [Medicago truncatula] gi|355486958|gb|AES68161.1| SNF4b
           [Medicago truncatula]
          Length = 394

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 5/114 (4%)
 Frame = -1

Query: 410 GKGRKLIGTFSATDLRGCPISLLQSWLYISVLEFTEKHQPGRL-----TDSSIGHSSREL 246
           G+ RKL+GTFSATDLRGC I+ L+SWL IS L FTE+     L     T + IG   REL
Sbjct: 279 GRCRKLVGTFSATDLRGCYINTLKSWLGISALAFTEQIATSPLYTTSDTQNDIGTPKREL 338

Query: 245 VTCWKHTSLAEXXXXXXXXXXXXXXXXNEQGLLVGIVSLTDMLRVIRSLLLFES 84
           VTC+  ++L+E                +++GLLVG+VSLTD++RVIR  +L ++
Sbjct: 339 VTCYAESTLSEVIDKAVANHVHRVWVVDQEGLLVGVVSLTDVIRVIRQSMLSDA 392


>gb|AAO61675.1| SNF4b [Medicago truncatula]
          Length = 382

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 5/114 (4%)
 Frame = -1

Query: 410 GKGRKLIGTFSATDLRGCPISLLQSWLYISVLEFTEKHQPGRL-----TDSSIGHSSREL 246
           G+ RKL+GTFSATDLRGC I+ L+SWL IS L FTE+     L     T + IG   REL
Sbjct: 267 GRCRKLVGTFSATDLRGCYINTLKSWLGISALAFTEQIATSPLYTTSDTQNDIGTPKREL 326

Query: 245 VTCWKHTSLAEXXXXXXXXXXXXXXXXNEQGLLVGIVSLTDMLRVIRSLLLFES 84
           VTC+  ++L+E                +++GLLVG+VSLTD++RVIR  +L ++
Sbjct: 327 VTCYAESTLSEVIDKAVANHVHRVWVVDQEGLLVGVVSLTDVIRVIRQSMLSDA 380


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