BLASTX nr result

ID: Coptis21_contig00031777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031777
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20238.3| unnamed protein product [Vitis vinifera]              122   3e-26
ref|XP_002282857.1| PREDICTED: protein transport protein Sec24-l...   122   3e-26
ref|XP_002533043.1| Protein transport protein Sec24A, putative [...   118   6e-25
ref|XP_003626160.1| Protein transport protein Sec24-like protein...   111   5e-23
ref|XP_002316316.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23

>emb|CBI20238.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/89 (67%), Positives = 68/89 (76%)
 Frame = +3

Query: 3   RDLVQLRIVKALREYRNLYSVQHRLGSSLIYPESXXXXXXXXXXXCKSVPLRGGYADSHL 182
           R+ VQLR+VKA +EYRNLY+VQHRLG  +IYPES           CKS PLRGGYAD+ L
Sbjct: 714 RNSVQLRLVKAFKEYRNLYAVQHRLGGRMIYPESLKLLPLYALALCKSTPLRGGYADAQL 773

Query: 183 DERLAAAYMMMTLPVTRLLKLLYPTLIRV 269
           DER AA Y MMTLPV RLLKLLYP+LIR+
Sbjct: 774 DERCAAGYTMMTLPVKRLLKLLYPSLIRI 802


>ref|XP_002282857.1| PREDICTED: protein transport protein Sec24-like At3g07100-like [Vitis
            vinifera]
          Length = 1052

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/89 (67%), Positives = 68/89 (76%)
 Frame = +3

Query: 3    RDLVQLRIVKALREYRNLYSVQHRLGSSLIYPESXXXXXXXXXXXCKSVPLRGGYADSHL 182
            R+ VQLR+VKA +EYRNLY+VQHRLG  +IYPES           CKS PLRGGYAD+ L
Sbjct: 822  RNSVQLRLVKAFKEYRNLYAVQHRLGGRMIYPESLKLLPLYALALCKSTPLRGGYADAQL 881

Query: 183  DERLAAAYMMMTLPVTRLLKLLYPTLIRV 269
            DER AA Y MMTLPV RLLKLLYP+LIR+
Sbjct: 882  DERCAAGYTMMTLPVKRLLKLLYPSLIRI 910


>ref|XP_002533043.1| Protein transport protein Sec24A, putative [Ricinus communis]
            gi|223527181|gb|EEF29351.1| Protein transport protein
            Sec24A, putative [Ricinus communis]
          Length = 1031

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/89 (66%), Positives = 66/89 (74%)
 Frame = +3

Query: 3    RDLVQLRIVKALREYRNLYSVQHRLGSSLIYPESXXXXXXXXXXXCKSVPLRGGYADSHL 182
            R+ VQLRIVKA REYRNLY+VQHRLG  +IYPES           CKS PLRGGYAD  L
Sbjct: 797  RNSVQLRIVKAFREYRNLYAVQHRLGGRMIYPESLKFLPLYGLALCKSTPLRGGYADVQL 856

Query: 183  DERLAAAYMMMTLPVTRLLKLLYPTLIRV 269
            DER AA + MM+LPV +LLKLLYP LIR+
Sbjct: 857  DERCAAGFTMMSLPVKKLLKLLYPCLIRI 885


>ref|XP_003626160.1| Protein transport protein Sec24-like protein [Medicago truncatula]
            gi|355501175|gb|AES82378.1| Protein transport protein
            Sec24-like protein [Medicago truncatula]
          Length = 1239

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/89 (61%), Positives = 66/89 (74%)
 Frame = +3

Query: 3    RDLVQLRIVKALREYRNLYSVQHRLGSSLIYPESXXXXXXXXXXXCKSVPLRGGYADSHL 182
            R+ VQLRIVKAL+EYRNLY+VQHRL + +IYPES           CKS  LRGGY D  L
Sbjct: 1006 RNAVQLRIVKALKEYRNLYAVQHRLANRMIYPESLRLLKLYGLALCKSTALRGGYGDVSL 1065

Query: 183  DERLAAAYMMMTLPVTRLLKLLYPTLIRV 269
            D+R AA + MMTLP+ +LLKLLYP+LIR+
Sbjct: 1066 DDRCAAGHTMMTLPIKKLLKLLYPSLIRL 1094


>ref|XP_002316316.1| predicted protein [Populus trichocarpa] gi|222865356|gb|EEF02487.1|
            predicted protein [Populus trichocarpa]
          Length = 1037

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/89 (62%), Positives = 63/89 (70%)
 Frame = +3

Query: 3    RDLVQLRIVKALREYRNLYSVQHRLGSSLIYPESXXXXXXXXXXXCKSVPLRGGYADSHL 182
            R  VQLRIVKALREYRNLY++QHRLG  +IYPE            CKS  LRGGYAD  L
Sbjct: 803  RSSVQLRIVKALREYRNLYAMQHRLGGRMIYPEPLKFLPLYGLALCKSAALRGGYADVQL 862

Query: 183  DERLAAAYMMMTLPVTRLLKLLYPTLIRV 269
            D+R AA + MM LPV  +LKLLYP+LIRV
Sbjct: 863  DDRCAAGFTMMALPVKTMLKLLYPSLIRV 891


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