BLASTX nr result

ID: Coptis21_contig00031767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031767
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001189517.1| uncharacterized protein [Arabidopsis thalian...    80   2e-13
ref|NP_001189516.1| uncharacterized protein [Arabidopsis thalian...    80   2e-13
ref|YP_005090391.1| orf100 (mitochondrion) [Phoenix dactylifera]...    75   4e-12
ref|YP_588283.1| hypothetical protein ZeamMp018 [Zea mays subsp....    75   6e-12
gb|AFK35953.1| unknown [Lotus japonicus]                               62   2e-11

>ref|NP_001189517.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330250991|gb|AEC06085.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 346

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 46/68 (67%), Positives = 48/68 (70%)
 Frame = -3

Query: 311 DLAGEAIPVRGREQDSKSSVPCVRFFSTNXTDSLRITVGRWLPKETPIRSAPQLGGIYLI 132
           DLAGE       E  + S    VRFFST    SLRITVGRWLPKET IRSAP+ GGIYLI
Sbjct: 281 DLAGERSQFAA-ENKTASERTFVRFFSTKH-GSLRITVGRWLPKETAIRSAPRKGGIYLI 338

Query: 131 PITRRGSP 108
           PITRRGSP
Sbjct: 339 PITRRGSP 346


>ref|NP_001189516.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330250990|gb|AEC06084.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 261

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 46/68 (67%), Positives = 48/68 (70%)
 Frame = -3

Query: 311 DLAGEAIPVRGREQDSKSSVPCVRFFSTNXTDSLRITVGRWLPKETPIRSAPQLGGIYLI 132
           DLAGE       E  + S    VRFFST    SLRITVGRWLPKET IRSAP+ GGIYLI
Sbjct: 196 DLAGERSQFAA-ENKTASERTFVRFFSTKH-GSLRITVGRWLPKETAIRSAPRKGGIYLI 253

Query: 131 PITRRGSP 108
           PITRRGSP
Sbjct: 254 PITRRGSP 261


>ref|YP_005090391.1| orf100 (mitochondrion) [Phoenix dactylifera]
           gi|343478443|gb|AEM43931.1| orf100 (mitochondrion)
           [Phoenix dactylifera]
          Length = 99

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/69 (65%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
 Frame = +1

Query: 142 MPPSWGADRIGVSLGSHRPTVILKLSVXLVEKKRT--QGTLDLLSCSLPRTGIASPARSG 315
           MPPS GADRIGVSLGSHRPTVILKL   LVEKKRT  +    L S +      A P+R  
Sbjct: 1   MPPSRGADRIGVSLGSHRPTVILKLQ-CLVEKKRTKVRSLAVLFSAADWDRSPAGPSRRK 59

Query: 316 LEQHCMRTY 342
           LEQHCMRTY
Sbjct: 60  LEQHCMRTY 68


>ref|YP_588283.1| hypothetical protein ZeamMp018 [Zea mays subsp. mays]
           gi|94502697|ref|YP_588309.1| hypothetical protein
           ZeamMp047 [Zea mays subsp. mays]
           gi|40795135|gb|AAR91179.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|40795136|gb|AAR91180.1|
           hypothetical protein (mitochondrion) [Zea mays]
          Length = 99

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/69 (63%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
 Frame = +1

Query: 142 MPPSWGADRIGVSLGSHRPTVILKLSVXLVEKKRT--QGTLDLLSCSLPRTGIASPARSG 315
           MPPS GADRIGVSLGSHRPTV+LKL + LVEKKRT  +    L S +      A P+R  
Sbjct: 1   MPPSRGADRIGVSLGSHRPTVLLKL-LCLVEKKRTKVRSLAVLFSAADWDRSPARPSRKK 59

Query: 316 LEQHCMRTY 342
           LEQHCMRTY
Sbjct: 60  LEQHCMRTY 68


>gb|AFK35953.1| unknown [Lotus japonicus]
          Length = 61

 Score = 62.0 bits (149), Expect(2) = 2e-11
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = +1

Query: 142 MPPSWGADRIGVSLGSHRPTVILKLSVXLVEKKRTQ 249
           MPPSWGADRIGVSLGSHRPT ILKL   LVEKKRT+
Sbjct: 1   MPPSWGADRIGVSLGSHRPTAILKLP-CLVEKKRTK 35



 Score = 32.0 bits (71), Expect(2) = 2e-11
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +3

Query: 234 EEANTRYARLAVLFSAANWDR 296
           E+  T+   LAVLFSAANWDR
Sbjct: 30  EKKRTKVRSLAVLFSAANWDR 50


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