BLASTX nr result

ID: Coptis21_contig00031732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031732
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334596.1| predicted protein [Populus trichocarpa] gi|2...    69   7e-10
ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002330356.1| predicted protein [Populus trichocarpa] gi|2...    67   3e-09
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    66   6e-09

>ref|XP_002334596.1| predicted protein [Populus trichocarpa] gi|222873401|gb|EEF10532.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
 Frame = +3

Query: 75  PSDILFDILSRIPIKCIVILRCVSKPWLDKPTDSFVMNCTKKRPKLLSRYIPDVSYQARP 254
           PS ++ DILSR+PIK I+  RCV K WL   +DSF      +R    S  +  +S     
Sbjct: 29  PSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSP-TSLLLKTISNNPES 87

Query: 255 KHFTEGFMVSSVDYGESRKAVEVNSTMPDIHSYTGDFEAWNSCDGLLCLTYC-KEFQRKV 431
           ++  +   V+    G   + VE    +P I+    DF   NSC+GLLC++   ++     
Sbjct: 88  RNL-QLVQVTGKPLGLRFRVVEEMKFVPGINLPYNDFLIENSCNGLLCISQTFQDGSHDD 146

Query: 432 LCLWNPTTGDYMEFPTRDHCPFSSLCCGHKTVFSVGFNPNVNSYFVI 572
           + L NP  G+Y+  P     P +     H + F++G++     Y V+
Sbjct: 147 IYLCNPILGEYISIP-----PAAGQETRHNSSFALGYSAIAKEYKVL 188


>ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|222871558|gb|EEF08689.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
 Frame = +3

Query: 75  PSDILFDILSRIPIKCIVILRCVSKPWLDKPTDSFVMNCTKKRPKLLSRYIPDVSYQARP 254
           PS ++ DILSR+PIK I+  RCV K WL   +DSF      +R    S  +  +S     
Sbjct: 29  PSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSP-TSLLVKTISNNPES 87

Query: 255 KHFTEGFMVSSVDYGESRKAVEVNSTMPDIH-SYTGDFEAWNSCDGLLCLTYCKEFQ--- 422
           +   +   ++    G   + VE    + +I+  Y  DF   NSC+GLLC++  K FQ   
Sbjct: 88  RS-VQLVQITGKPVGLRFRVVEEMKFVQEINLPYNNDFLIENSCNGLLCIS--KTFQDGS 144

Query: 423 RKVLCLWNPTTGDYMEFPTRDHCPFSSLCCGHKTVFSVGFNPNVNSYFVI 572
              + L NP  G+Y+  P       +     HK  FS+G++     Y V+
Sbjct: 145 HDDIYLCNPILGEYISIPLA-----AGQGTRHKRSFSLGYSAITKEYKVL 189


>ref|XP_002330356.1| predicted protein [Populus trichocarpa] gi|222871560|gb|EEF08691.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
 Frame = +3

Query: 75  PSDILFDILSRIPIKCIVILRCVSKPWLDKPTDSFVMNCTKKRPKLLSRYIPDVSYQARP 254
           PS ++ DILSR+PIK I+  RCV K WL   +DSF      +R    S  +  +S     
Sbjct: 29  PSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSP-TSLLVKTISNNPES 87

Query: 255 KHFTEGFMVSSVDYGESRKAVEVNSTMPDIH-SYTGDFEAWNSCDGLLCLTYC-KEFQRK 428
           +   +   ++    G   + VE    + +I+  Y  DF   NSC+GLLC++   ++    
Sbjct: 88  RS-VQLVQITGKPVGLRFRVVEEMKFVQEINLPYNNDFLIENSCNGLLCISQTFQDGSHD 146

Query: 429 VLCLWNPTTGDYMEFPTRDHCPFSSLCCGHKTVFSVGFNPNVNSYFVI 572
            + L NP  G+Y+  P       +     HK  FS+G++     Y V+
Sbjct: 147 DIYLCNPILGEYISIPLA-----AGQGTRHKRSFSLGYSAITKEYKVL 189


>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 52/179 (29%), Positives = 77/179 (43%), Gaps = 5/179 (2%)
 Frame = +3

Query: 75  PSDILFDILSRIPIKCIVILRCVSKPWLDKPTDSFVMNCTKKRPK--LLSRYIPDVSYQA 248
           P DI  DIL ++P+K  +  RCV + W +  +DS+     ++R +  L+ R  P    + 
Sbjct: 29  PDDITADILLQLPLKSKIQCRCVCRTWRNLLSDSYFSEVQRERAQSMLVLRSPPSCVSRK 88

Query: 249 RPKHFTEGFMVSSVDYGESRKAV---EVNSTMPDIHSYTGDFEAWNSCDGLLCLTYCKEF 419
                   F V  ++ G  R  V      + +P  H      E   SC+GLLCL    + 
Sbjct: 89  AAALAPNDFYVVDLESGSVRNNVMKLNTKNNLPTCH-----VELVGSCNGLLCL--FDKN 141

Query: 420 QRKVLCLWNPTTGDYMEFPTRDHCPFSSLCCGHKTVFSVGFNPNVNSYFVIRIETHSLT 596
            +KV  L NP TG+++  P                V   GF+P  N Y V+RI    LT
Sbjct: 142 SKKVFYLCNPVTGEHVRTPANCKKEKQRGKTILDAVLGFGFSPKSNHYMVLRITRKKLT 200


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 52/172 (30%), Positives = 73/172 (42%), Gaps = 4/172 (2%)
 Frame = +3

Query: 75  PSDILFDILSRIPIKCIVILRCVSKPW----LDKPTDSFVMNCTKKRPKLLSRYIPDVSY 242
           P +I  DILSR+PI  +V  +CV + W    LD    +  ++C+ +         P V  
Sbjct: 29  PREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQETD------PCVIL 82

Query: 243 QARPKHFTEGFMVSSVDYGESRKAVEVNSTMPDIHSYTGDFEAWNSCDGLLCLTYCKEFQ 422
                     + V    + E ++  +V        S   +FE   SC+GLLCL+      
Sbjct: 83  HCDFPIRNNLYFVDFAAHEEEKE--KVKRIRAPFSSMMPEFEVVGSCNGLLCLS--DSLF 138

Query: 423 RKVLCLWNPTTGDYMEFPTRDHCPFSSLCCGHKTVFSVGFNPNVNSYFVIRI 578
              L ++NP TG Y E P     P        + VF  GFNP  N Y VIRI
Sbjct: 139 NDSLYIYNPFTGRYKELPKSLQYP------DQEVVFGFGFNPKTNEYKVIRI 184


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