BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031658
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26017.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   164   9e-39
ref|XP_002312761.1| predicted protein [Populus trichocarpa] gi|2...   157   6e-37
ref|XP_004138518.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   156   2e-36
ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   155   2e-36

>emb|CBI26017.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/111 (73%), Positives = 91/111 (81%), Gaps = 3/111 (2%)
 Frame = +3

Query: 84  GLGVEDTSLYGNPS---YKWRIVIAYDGAHFSGWQYQQSSATIQGIVEKALTRATRLERG 254
           G G  D+   GN S   YKWR+VIAY+G  +SGWQYQQS  TIQ IVEKALTRAT+LER 
Sbjct: 28  GGGGGDSIHLGNTSASGYKWRLVIAYEGTRYSGWQYQQSPPTIQCIVEKALTRATKLERE 87

Query: 255 ELTLVGASRTDKGVHAWGQVAHFITPFNYDSLESLHAALNGILPSDIRVRE 407
           +L LVGASRTD GVHAWGQVAHF+TPFNYD LES+HAALNG+LP DIRVRE
Sbjct: 88  DLYLVGASRTDTGVHAWGQVAHFLTPFNYDGLESIHAALNGLLPPDIRVRE 138


>ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Vitis vinifera]
          Length = 336

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/111 (73%), Positives = 91/111 (81%), Gaps = 3/111 (2%)
 Frame = +3

Query: 84  GLGVEDTSLYGNPS---YKWRIVIAYDGAHFSGWQYQQSSATIQGIVEKALTRATRLERG 254
           G G  D+   GN S   YKWR+VIAY+G  +SGWQYQQS  TIQ IVEKALTRAT+LER 
Sbjct: 38  GGGGGDSIHLGNTSASGYKWRLVIAYEGTRYSGWQYQQSPPTIQCIVEKALTRATKLERE 97

Query: 255 ELTLVGASRTDKGVHAWGQVAHFITPFNYDSLESLHAALNGILPSDIRVRE 407
           +L LVGASRTD GVHAWGQVAHF+TPFNYD LES+HAALNG+LP DIRVRE
Sbjct: 98  DLYLVGASRTDTGVHAWGQVAHFLTPFNYDGLESIHAALNGLLPPDIRVRE 148


>ref|XP_002312761.1| predicted protein [Populus trichocarpa] gi|222852581|gb|EEE90128.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  157 bits (398), Expect = 6e-37
 Identities = 71/94 (75%), Positives = 85/94 (90%)
 Frame = +3

Query: 126 YKWRIVIAYDGAHFSGWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAW 305
           +KWR++I+YDG H+ GWQ+QQ+  TIQ I+EKALTRAT+LER +L LVGASRTD GVHAW
Sbjct: 57  FKWRLLISYDGTHYKGWQFQQTPPTIQCILEKALTRATKLERKDLHLVGASRTDGGVHAW 116

Query: 306 GQVAHFITPFNYDSLESLHAALNGILPSDIRVRE 407
           GQVAHF+TPFNYDSL+S+HAALNG+LP DIRVRE
Sbjct: 117 GQVAHFVTPFNYDSLDSIHAALNGLLPPDIRVRE 150


>ref|XP_004138518.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Cucumis sativus]
           gi|449518841|ref|XP_004166444.1| PREDICTED: tRNA
           pseudouridine synthase A 1-like [Cucumis sativus]
          Length = 335

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/96 (73%), Positives = 85/96 (88%)
 Frame = +3

Query: 120 PSYKWRIVIAYDGAHFSGWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVH 299
           P +KWR++IAYDG  ++GWQYQ+S  TIQ ++E+AL  AT+LER +L LVGASRTDKGVH
Sbjct: 52  PCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVH 111

Query: 300 AWGQVAHFITPFNYDSLESLHAALNGILPSDIRVRE 407
           AWGQVAHF+TPFNYDSLES+HAALNG+LP DIRVRE
Sbjct: 112 AWGQVAHFVTPFNYDSLESVHAALNGLLPVDIRVRE 147


>ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 327

 Score =  155 bits (393), Expect = 2e-36
 Identities = 70/94 (74%), Positives = 83/94 (88%)
 Frame = +3

Query: 126 YKWRIVIAYDGAHFSGWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAW 305
           YKWRIV+AYDG  ++GWQYQ+S  T+Q  VEKALT+AT+L+R +L LVGASRTD GVHAW
Sbjct: 44  YKWRIVLAYDGTQYAGWQYQESPPTVQCTVEKALTQATKLQRKDLCLVGASRTDAGVHAW 103

Query: 306 GQVAHFITPFNYDSLESLHAALNGILPSDIRVRE 407
           GQVAHF TPFNYD+LE LHAALNG+LP+DIR+RE
Sbjct: 104 GQVAHFFTPFNYDNLEQLHAALNGLLPTDIRIRE 137