BLASTX nr result

ID: Coptis21_contig00031654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031654
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311473.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002526283.1| ATP binding protein, putative [Ricinus commu...   113   2e-23
ref|XP_002315920.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
emb|CAN73490.1| hypothetical protein VITISV_040575 [Vitis vinifera]   110   1e-22
ref|XP_002282768.1| PREDICTED: probable inactive leucine-rich re...   110   2e-22

>ref|XP_002311473.1| predicted protein [Populus trichocarpa] gi|222851293|gb|EEE88840.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/70 (77%), Positives = 56/70 (80%)
 Frame = -3

Query: 214 VVSLNDEGVVLLSFKQYIKEDPEGSLSNWNSSDETPCSWNGITCKDEKVASLSIPKKKLV 35
           V SLN EG  LLSFKQ I EDPEGSLSNWNSSD+ PCSWNG+TCKD KV SLSIPKKKL 
Sbjct: 18  VTSLNSEGYALLSFKQSINEDPEGSLSNWNSSDDNPCSWNGVTCKDLKVMSLSIPKKKLY 77

Query: 34  GVFPPVLGSL 5
           G  P  LGSL
Sbjct: 78  GFLPSALGSL 87


>ref|XP_002526283.1| ATP binding protein, putative [Ricinus communis]
           gi|223534364|gb|EEF36072.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 715

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/70 (75%), Positives = 58/70 (82%)
 Frame = -3

Query: 214 VVSLNDEGVVLLSFKQYIKEDPEGSLSNWNSSDETPCSWNGITCKDEKVASLSIPKKKLV 35
           V+SLN EG  LLSFKQ I +DPEGSLSNWNSSDETPCSWNG+TCK+ KV S+SIPKKKL 
Sbjct: 17  VISLNSEGFALLSFKQSIYQDPEGSLSNWNSSDETPCSWNGVTCKELKVVSVSIPKKKLF 76

Query: 34  GVFPPVLGSL 5
           G  P  LGSL
Sbjct: 77  GFLPSSLGSL 86


>ref|XP_002315920.1| predicted protein [Populus trichocarpa] gi|222864960|gb|EEF02091.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/75 (70%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
 Frame = -3

Query: 226 SCDQVVS-LNDEGVVLLSFKQYIKEDPEGSLSNWNSSDETPCSWNGITCKDEKVASLSIP 50
           +C  +VS LN+EG  LLSFKQ I EDPEGSLSNWNSSD+ PCSWNG+TCKD KV S+SIP
Sbjct: 13  NCHSLVSCLNNEGYALLSFKQSIYEDPEGSLSNWNSSDDNPCSWNGVTCKDFKVMSVSIP 72

Query: 49  KKKLVGVFPPVLGSL 5
           KK+L G  P  LGSL
Sbjct: 73  KKRLYGFLPSALGSL 87


>emb|CAN73490.1| hypothetical protein VITISV_040575 [Vitis vinifera]
          Length = 713

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/71 (71%), Positives = 59/71 (83%)
 Frame = -3

Query: 217 QVVSLNDEGVVLLSFKQYIKEDPEGSLSNWNSSDETPCSWNGITCKDEKVASLSIPKKKL 38
           +V SLN+EGV LLSFK+ + EDPE SL NWNSSDE PCSWNGITCK+E+V S+SIPKKKL
Sbjct: 17  KVGSLNEEGVALLSFKRSVGEDPERSLDNWNSSDENPCSWNGITCKEERVVSVSIPKKKL 76

Query: 37  VGVFPPVLGSL 5
           +G  P  LGSL
Sbjct: 77  LGFLPSALGSL 87


>ref|XP_002282768.1| PREDICTED: probable inactive leucine-rich repeat receptor-like
           protein kinase At1g66830 [Vitis vinifera]
           gi|297737773|emb|CBI26974.3| unnamed protein product
           [Vitis vinifera]
          Length = 713

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/70 (72%), Positives = 58/70 (82%)
 Frame = -3

Query: 214 VVSLNDEGVVLLSFKQYIKEDPEGSLSNWNSSDETPCSWNGITCKDEKVASLSIPKKKLV 35
           V SLN+EGV LLSFK+ + EDPE SL NWNSSDE PCSWNGITCK+E+V S+SIPKKKL+
Sbjct: 18  VGSLNEEGVALLSFKRSVGEDPERSLDNWNSSDENPCSWNGITCKEERVVSVSIPKKKLL 77

Query: 34  GVFPPVLGSL 5
           G  P  LGSL
Sbjct: 78  GFLPSALGSL 87


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