BLASTX nr result

ID: Coptis21_contig00031652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031652
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_188226.1| putative pyridoxal biosynthesis protein PDX1.2 ...   151   6e-35
ref|XP_002885122.1| hypothetical protein ARALYDRAFT_479060 [Arab...   151   6e-35
ref|XP_002862267.1| hypothetical protein ARALYDRAFT_497537 [Arab...   151   6e-35
ref|XP_002516058.1| Pyridoxin biosynthesis protein PDX1, putativ...   147   1e-33
ref|XP_002299701.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33

>ref|NP_188226.1| putative pyridoxal biosynthesis protein PDX1.2 [Arabidopsis
           thaliana] gi|45477214|sp|Q9ZNR6.1|PDX12_ARATH RecName:
           Full=Probable pyridoxal biosynthesis protein PDX1.2;
           Short=AtPDX1.2; Short=AtPDX1;3 gi|4103952|gb|AAD01897.1|
           A37 [Arabidopsis thaliana] gi|4103954|gb|AAD01898.1| A37
           [Arabidopsis thaliana] gi|9294451|dbj|BAB02670.1| A37
           protein; ethylene-inducible protein-like [Arabidopsis
           thaliana] gi|27808576|gb|AAO24568.1| At3g16050
           [Arabidopsis thaliana] gi|110736159|dbj|BAF00051.1|
           putative ethylene-inducible protein [Arabidopsis
           thaliana] gi|332642245|gb|AEE75766.1| putative pyridoxal
           biosynthesis protein PDX1.2 [Arabidopsis thaliana]
          Length = 314

 Score =  151 bits (381), Expect = 6e-35
 Identities = 75/107 (70%), Positives = 86/107 (80%)
 Frame = +2

Query: 2   RGLGEALSRVREGAALIRIQGELSRMGNIVETVRNVRSVMGDIRVLNYMDDDEIFAFAKR 181
           R  GEAL R+REGAA+IRIQG+L+  GNI ETV+NVRS+MG++RVLN MDDDE+F FAK+
Sbjct: 150 RDTGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKK 209

Query: 182 ISAPYDLVAQTKQMGRLPVVLFXXXXXXXXXXXXLMMQLGCDGVFVG 322
           ISAPYDLVAQTKQMGR+PVV F            LMMQLGCDGVFVG
Sbjct: 210 ISAPYDLVAQTKQMGRVPVVQFASGGITTPADAALMMQLGCDGVFVG 256


>ref|XP_002885122.1| hypothetical protein ARALYDRAFT_479060 [Arabidopsis lyrata subsp.
           lyrata] gi|297330962|gb|EFH61381.1| hypothetical protein
           ARALYDRAFT_479060 [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score =  151 bits (381), Expect = 6e-35
 Identities = 75/107 (70%), Positives = 86/107 (80%)
 Frame = +2

Query: 2   RGLGEALSRVREGAALIRIQGELSRMGNIVETVRNVRSVMGDIRVLNYMDDDEIFAFAKR 181
           R  GEAL R+REGAA+IRIQG+L+  GNI ETV+NVRS+MG++RVLN MDDDE+F FAK+
Sbjct: 145 RDTGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKK 204

Query: 182 ISAPYDLVAQTKQMGRLPVVLFXXXXXXXXXXXXLMMQLGCDGVFVG 322
           ISAPYDLVAQTKQMGR+PVV F            LMMQLGCDGVFVG
Sbjct: 205 ISAPYDLVAQTKQMGRVPVVQFASGGITTPADAALMMQLGCDGVFVG 251


>ref|XP_002862267.1| hypothetical protein ARALYDRAFT_497537 [Arabidopsis lyrata subsp.
           lyrata] gi|297307590|gb|EFH38525.1| hypothetical protein
           ARALYDRAFT_497537 [Arabidopsis lyrata subsp. lyrata]
          Length = 314

 Score =  151 bits (381), Expect = 6e-35
 Identities = 75/107 (70%), Positives = 86/107 (80%)
 Frame = +2

Query: 2   RGLGEALSRVREGAALIRIQGELSRMGNIVETVRNVRSVMGDIRVLNYMDDDEIFAFAKR 181
           R  GEAL R+REGAA+IRIQG+L+  GNI ETV+NVRS+MG++RVLN MDDDE+F FAK+
Sbjct: 150 RDTGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKK 209

Query: 182 ISAPYDLVAQTKQMGRLPVVLFXXXXXXXXXXXXLMMQLGCDGVFVG 322
           ISAPYDLVAQTKQMGR+PVV F            LMMQLGCDGVFVG
Sbjct: 210 ISAPYDLVAQTKQMGRVPVVQFASGGITTPADAALMMQLGCDGVFVG 256


>ref|XP_002516058.1| Pyridoxin biosynthesis protein PDX1, putative [Ricinus communis]
           gi|223544963|gb|EEF46478.1| Pyridoxin biosynthesis
           protein PDX1, putative [Ricinus communis]
          Length = 305

 Score =  147 bits (370), Expect = 1e-33
 Identities = 75/107 (70%), Positives = 85/107 (79%)
 Frame = +2

Query: 2   RGLGEALSRVREGAALIRIQGELSRMGNIVETVRNVRSVMGDIRVLNYMDDDEIFAFAKR 181
           R LGEAL RVREGAA+IR QGEL   GN+ ETVRNVR+VM +IR+LN MD+DE+FAFAK+
Sbjct: 141 RDLGEALRRVREGAAMIRTQGELRGYGNVGETVRNVRNVMKEIRILNNMDEDEMFAFAKK 200

Query: 182 ISAPYDLVAQTKQMGRLPVVLFXXXXXXXXXXXXLMMQLGCDGVFVG 322
           I+APYDLVAQTKQMGRLPVV F            LMMQLGCDG+FVG
Sbjct: 201 INAPYDLVAQTKQMGRLPVVQFAAGGIATPADAALMMQLGCDGIFVG 247


>ref|XP_002299701.1| predicted protein [Populus trichocarpa] gi|222846959|gb|EEE84506.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  145 bits (365), Expect = 4e-33
 Identities = 72/107 (67%), Positives = 84/107 (78%)
 Frame = +2

Query: 2   RGLGEALSRVREGAALIRIQGELSRMGNIVETVRNVRSVMGDIRVLNYMDDDEIFAFAKR 181
           R LGEAL RVREGAA+IR QGE+   GN+ ETV+NVR+VM ++RVLN MD+DE+FAFAK+
Sbjct: 141 RNLGEALRRVREGAAMIRTQGEILGQGNVAETVKNVRNVMKEVRVLNNMDEDEVFAFAKK 200

Query: 182 ISAPYDLVAQTKQMGRLPVVLFXXXXXXXXXXXXLMMQLGCDGVFVG 322
           I+APYDLVAQ KQMGRLPVV F            LMMQLGCDG+FVG
Sbjct: 201 IAAPYDLVAQIKQMGRLPVVQFAAGGIVTPADAALMMQLGCDGIFVG 247


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