BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031604
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26320.3| unnamed protein product [Vitis vinifera]              150   8e-35
ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35
ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_003555290.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   141   5e-32
ref|XP_003595326.1| Pentatricopeptide repeat-containing protein ...   136   2e-30

>emb|CBI26320.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  150 bits (380), Expect = 8e-35
 Identities = 67/92 (72%), Positives = 86/92 (93%)
 Frame = -3

Query: 277 DLLGRAGKLEEAKEAIRDMPMEPNAVVWRSLLGASRVHGTLELGQLALKNLIELEPETSG 98
           DLLGRAG+L EA+E + +MPM+PNAV+WRSLLGA+RVHG LE+G++ LK+LI+LEPETSG
Sbjct: 295 DLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSG 354

Query: 97  NYVLLSNMYASVNKWDDVEKVREVMKDQGVNK 2
           NYVLLSNMYAS+N+WDDV++VR++MKD G+NK
Sbjct: 355 NYVLLSNMYASINRWDDVKRVRKLMKDHGINK 386


>ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Vitis vinifera]
          Length = 590

 Score =  150 bits (380), Expect = 8e-35
 Identities = 67/92 (72%), Positives = 86/92 (93%)
 Frame = -3

Query: 277 DLLGRAGKLEEAKEAIRDMPMEPNAVVWRSLLGASRVHGTLELGQLALKNLIELEPETSG 98
           DLLGRAG+L EA+E + +MPM+PNAV+WRSLLGA+RVHG LE+G++ LK+LI+LEPETSG
Sbjct: 363 DLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSG 422

Query: 97  NYVLLSNMYASVNKWDDVEKVREVMKDQGVNK 2
           NYVLLSNMYAS+N+WDDV++VR++MKD G+NK
Sbjct: 423 NYVLLSNMYASINRWDDVKRVRKLMKDHGINK 454


>ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Glycine max]
          Length = 591

 Score =  145 bits (366), Expect = 3e-33
 Identities = 65/92 (70%), Positives = 86/92 (93%)
 Frame = -3

Query: 277 DLLGRAGKLEEAKEAIRDMPMEPNAVVWRSLLGASRVHGTLELGQLALKNLIELEPETSG 98
           DLLGRAG+L+EA+E ++DMPM+PNA++WRSLLGA+++HG LE+G+ ALK+LIELEPETSG
Sbjct: 364 DLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSG 423

Query: 97  NYVLLSNMYASVNKWDDVEKVREVMKDQGVNK 2
           NYVLLSNMYAS+ +W+DV++VR +MKD GV+K
Sbjct: 424 NYVLLSNMYASIGRWNDVKRVRMLMKDHGVDK 455


>ref|XP_003555290.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g43790-like [Glycine max]
          Length = 516

 Score =  141 bits (356), Expect = 5e-32
 Identities = 63/92 (68%), Positives = 85/92 (92%)
 Frame = -3

Query: 277 DLLGRAGKLEEAKEAIRDMPMEPNAVVWRSLLGASRVHGTLELGQLALKNLIELEPETSG 98
           DLLGRAG+L++A+E + DMPM+PNA++WRSLLGA+++HG LE+G+ ALK+LIELEPET G
Sbjct: 306 DLLGRAGRLKDAEERLHDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETRG 365

Query: 97  NYVLLSNMYASVNKWDDVEKVREVMKDQGVNK 2
           NYVLLSNMYAS+ +W+DV++VR +MKD+GV+K
Sbjct: 366 NYVLLSNMYASIARWNDVKRVRMLMKDRGVDK 397


>ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484374|gb|AES65577.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 740

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/92 (70%), Positives = 82/92 (89%)
 Frame = -3

Query: 277 DLLGRAGKLEEAKEAIRDMPMEPNAVVWRSLLGASRVHGTLELGQLALKNLIELEPETSG 98
           DLLGRAG+L+EA+E + DMPM+PNAV+WRSLLGA+R+HG L +G++AL  LIELEPETSG
Sbjct: 513 DLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSG 572

Query: 97  NYVLLSNMYASVNKWDDVEKVREVMKDQGVNK 2
           NYVLLSNMYASV + +DV++VR++MK  GVNK
Sbjct: 573 NYVLLSNMYASVGRVNDVKRVRKLMKHHGVNK 604