BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031558
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g...   187   2e-45
ref|XP_002323932.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g...   163   3e-38
ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g...   163   3e-38
ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus ...   162   7e-38

>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 648

 Score =  187 bits (474), Expect = 2e-45
 Identities = 106/234 (45%), Positives = 142/234 (60%), Gaps = 15/234 (6%)
 Frame = +3

Query: 6   INCRLLADTSQIGYMIGKSGSRIKSIEKDIGARIRV-SVERCPTCALPNDELIEITGDSL 182
           ++CRLLA+TSQ+G +IGK G  ++ I ++ G++I+V + E+ PTCA   DE++EI GD L
Sbjct: 151 VSCRLLAETSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVL 210

Query: 183 AVKKATLAVSQCLQDSPPVDRAQMAGSNSFMAAADGSFSYRHAE-FLSHPTFLPPTGSSF 359
           AVKKA +AVS+ LQD P VD+ ++ G          S      + F    + LPP  S+ 
Sbjct: 211 AVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGSVLPPIPSNT 270

Query: 360 VDNALRNCP-------------NKKPEEVAFKLLCSNERXXXXXXXXXXXXRALQNETGA 500
           +  A  + P                 +EV FK+LCSN+R            +ALQNE GA
Sbjct: 271 ISYASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGA 330

Query: 501 SIHVEAPVAESDDRVITISALENVESRYSPAQNAVVRIFTRSIEVGIENGLESG 662
           SI V APVAE D+R+ITI+A EN ESRYSPAQN V+ +F RSIE GIE GL+SG
Sbjct: 331 SISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSG 384


>ref|XP_002323932.1| predicted protein [Populus trichocarpa] gi|222866934|gb|EEF04065.1|
           predicted protein [Populus trichocarpa]
          Length = 722

 Score =  167 bits (424), Expect = 1e-39
 Identities = 99/259 (38%), Positives = 141/259 (54%), Gaps = 33/259 (12%)
 Frame = +3

Query: 6   INCRLLADTSQIGYMIGKSGSRIKSIEKDIGARIRVSVERCPTCALPNDELIEITGDSLA 185
           ++CR+LA+ S +G +IGK G  ++ I KD G RI+V V++ P CA  N+E+IEI GD  A
Sbjct: 134 VSCRMLAEVSSVGAVIGKGGKVVEKIRKDCGCRIKVLVDKLPDCAASNEEMIEIEGDVSA 193

Query: 186 VKKATLAVSQCLQDSPPVDRAQMAGSNSFMAAADGSFS-------YRHAEFL-------- 320
           VKK  +AVS+CLQD  PVD+ ++  S    A +  S S        RH+  L        
Sbjct: 194 VKKGLVAVSRCLQDCQPVDKTRVTNSKPAEAVSRVSLSDVRVEIHPRHSAVLPTIAQNSS 253

Query: 321 ------SHPTFLPPTGSSFVDNALRNCP------------NKKPEEVAFKLLCSNERXXX 446
                  H   LP    S ++ A R  P               P+++ F++LC+ +R   
Sbjct: 254 VLPTIPQHSLGLPTIPKSSINYASRVHPLSLESDRVVTPDTNIPQQLVFRILCTTDRIGG 313

Query: 447 XXXXXXXXXRALQNETGASIHVEAPVAESDDRVITISALENVESRYSPAQNAVVRIFTRS 626
                    RALQNETGA+I V   V+E D+R+IT++A EN ESRYS AQ  +V +F+R+
Sbjct: 314 VIGKGGNIVRALQNETGAAISVGPTVSECDERLITVTASENPESRYSAAQKTIVLVFSRA 373

Query: 627 IEVGIENGLESGENNDQTV 683
           +E GIE GL+ G +    V
Sbjct: 374 VESGIEKGLDPGSSRGSPV 392


>ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 643

 Score =  163 bits (412), Expect = 3e-38
 Identities = 94/239 (39%), Positives = 136/239 (56%), Gaps = 13/239 (5%)
 Frame = +3

Query: 6   INCRLLADTSQIGYMIGKSGSRIKSIEKDIGARIRVSVERCPTCALPNDELIEITGDSLA 185
           + CRLLAD +Q+G +IGK G  ++ I K+ G RIRV  ++ P CA P+DE+IEI GD  A
Sbjct: 165 VYCRLLADVAQVGSVIGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGDVWA 224

Query: 186 VKKATLAVSQCLQDSPPVDRAQMAGSNSFMAAADGSFSYRHAEFLSHPTFLP--PTGSSF 359
           +KKA LAVS+ LQD PP ++  +  + + +          H   L   + LP  P+ S+ 
Sbjct: 225 IKKALLAVSRRLQDCPPSEKRTVRPAEAVIHETLPDLHMDH--ILQRNSVLPILPSSSNI 282

Query: 360 VDNALRNC-----------PNKKPEEVAFKLLCSNERXXXXXXXXXXXXRALQNETGASI 506
             + + +             N   ++V FK+LC+N+R            RALQNE+GA++
Sbjct: 283 FASGIHSLSIDADMLPPVDTNVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATV 342

Query: 507 HVEAPVAESDDRVITISALENVESRYSPAQNAVVRIFTRSIEVGIENGLESGENNDQTV 683
            V   V   D+R+I+I+A EN+ESRYSPAQ AVV +F+RS++V IE   ES       V
Sbjct: 343 SVGPSVTGCDERLISITASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVV 401


>ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 658

 Score =  163 bits (412), Expect = 3e-38
 Identities = 94/239 (39%), Positives = 136/239 (56%), Gaps = 13/239 (5%)
 Frame = +3

Query: 6   INCRLLADTSQIGYMIGKSGSRIKSIEKDIGARIRVSVERCPTCALPNDELIEITGDSLA 185
           + CRLLAD +Q+G +IGK G  ++ I K+ G RIRV  ++ P CA P+DE+IEI GD  A
Sbjct: 160 VYCRLLADVAQVGSVIGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGDVWA 219

Query: 186 VKKATLAVSQCLQDSPPVDRAQMAGSNSFMAAADGSFSYRHAEFLSHPTFLP--PTGSSF 359
           +KKA LAVS+ LQD PP ++  +  + + +          H   L   + LP  P+ S+ 
Sbjct: 220 IKKALLAVSRRLQDCPPSEKRTVRPAEAVIHETLPDLHMDH--ILQRNSVLPILPSSSNI 277

Query: 360 VDNALRNC-----------PNKKPEEVAFKLLCSNERXXXXXXXXXXXXRALQNETGASI 506
             + + +             N   ++V FK+LC+N+R            RALQNE+GA++
Sbjct: 278 FASGIHSLSIDADMLPPVDTNVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATV 337

Query: 507 HVEAPVAESDDRVITISALENVESRYSPAQNAVVRIFTRSIEVGIENGLESGENNDQTV 683
            V   V   D+R+I+I+A EN+ESRYSPAQ AVV +F+RS++V IE   ES       V
Sbjct: 338 SVGPSVTGCDERLISITASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVV 396


>ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 698

 Score =  162 bits (409), Expect = 7e-38
 Identities = 93/225 (41%), Positives = 128/225 (56%), Gaps = 17/225 (7%)
 Frame = +3

Query: 6   INCRLLADTSQIGYMIGKSGSRIKSIEKDIGARIRVSVERCPTCALPNDELIEITGDSLA 185
           ++CR+LA + Q G +IGK G  ++ I KD G +IRV  ++ P CA PN+E+IEI GD L+
Sbjct: 158 VSCRMLAGSKQAGSVIGKGGKVVEKIRKDCGVKIRVLTDKLPVCAGPNEEMIEIEGDILS 217

Query: 186 VKKATLAVSQCLQDSPPVDRAQMAGSNSFMAAADGSFSYRHAEFLSHPTFLPPTGSSFVD 365
           VKKA +AVS+CLQD  PVD+ ++  S  F A           E       + PT     +
Sbjct: 218 VKKALIAVSRCLQDCQPVDKPRVGSSKYFEAVPQEPLPEMRVEIAPQRNIMVPT---MQN 274

Query: 366 NALRNCP---------NKKP--------EEVAFKLLCSNERXXXXXXXXXXXXRALQNET 494
           NA+   P         ++ P        +EV FK+LC N+             +ALQNET
Sbjct: 275 NAVSCAPVPHNFLLETDRVPSLDMKLFQQEVVFKILCPNDMVGGVIGKGGTIIKALQNET 334

Query: 495 GASIHVEAPVAESDDRVITISALENVESRYSPAQNAVVRIFTRSI 629
           GASI + A +AESD+R+IT+ A EN ESRYS AQ AVV +F+R +
Sbjct: 335 GASITIGATIAESDERLITVIASENPESRYSAAQKAVVLVFSRLV 379