BLASTX nr result

ID: Coptis21_contig00031495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031495
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510562.1| conserved hypothetical protein [Ricinus comm...    55   5e-06

>ref|XP_002510562.1| conserved hypothetical protein [Ricinus communis]
           gi|223551263|gb|EEF52749.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
 Frame = -3

Query: 389 DIPCMRWAPFIWGRILSLFTQTEAVD---LPYDIIIDIFSRLPAQLIFQCCHSCHMIRTL 219
           +  C  W   IW  +LS+F   +  D   LP DII +I SRLPA  + +CC      + L
Sbjct: 2   EFECFIWIVHIWKELLSIFPPLKGGDVRPLPNDIIFEILSRLPADEVLKCCSVSKEWKAL 61

Query: 218 TSSPTFVSIHLKRATSVVVIQ 156
             +P F    L RA  +V IQ
Sbjct: 62  VLTPFFSQAQLTRACPIVFIQ 82


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