BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031469
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326842.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containi...   113   1e-23
ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [...   110   9e-23
ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-22
ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   108   6e-22

>ref|XP_002326842.1| predicted protein [Populus trichocarpa] gi|222835157|gb|EEE73592.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/117 (48%), Positives = 78/117 (66%)
 Frame = +3

Query: 3   SQEIIDLMWSDHLDYETGFSVLDSLMRAFLKVDMIKQVLLVVGKMREEGLKPXXXXXXXX 182
           S+E+++ MW  H ++E+ FSVLD+LMR FLKV+M  + L +VG+MRE GL+P        
Sbjct: 61  SREVVEFMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITIL 120

Query: 183 XXXXXGRGEFGLVWSLFRDMIGKGPRPSNYTFNVMILGFCKRGNVRVAESILHVMSK 353
                  G+ G VW L R MI +GPRP N  FN +ILGFC++G+V+V ES+L VM K
Sbjct: 121 FKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQK 177


>ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/117 (44%), Positives = 78/117 (66%)
 Frame = +3

Query: 3   SQEIIDLMWSDHLDYETGFSVLDSLMRAFLKVDMIKQVLLVVGKMREEGLKPXXXXXXXX 182
           S ++++ MW  H  YE+ FSVLDSLMRAF+  +M  Q L ++G+MRE G++P        
Sbjct: 178 SGDLVEFMWRGHHVYESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAIL 237

Query: 183 XXXXXGRGEFGLVWSLFRDMIGKGPRPSNYTFNVMILGFCKRGNVRVAESILHVMSK 353
                  G++G VW LF+D+I +GP+P  YTF+ +ILGFC++G + + ES+LH+M K
Sbjct: 238 FKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPK 294


>ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/117 (47%), Positives = 74/117 (63%)
 Frame = +3

Query: 3   SQEIIDLMWSDHLDYETGFSVLDSLMRAFLKVDMIKQVLLVVGKMREEGLKPXXXXXXXX 182
           + +I+D MW +H  YE+ FSVL++L+R FL V M  + L V+  MR  G++P        
Sbjct: 159 TNKIVDFMWRNHAMYESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITIL 218

Query: 183 XXXXXGRGEFGLVWSLFRDMIGKGPRPSNYTFNVMILGFCKRGNVRVAESILHVMSK 353
                  G++G VW LF+DMI KGPRPSN TFN MI GFC++  V V ES+LH+M K
Sbjct: 219 LRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPK 275


>ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/117 (43%), Positives = 74/117 (63%)
 Frame = +3

Query: 3   SQEIIDLMWSDHLDYETGFSVLDSLMRAFLKVDMIKQVLLVVGKMREEGLKPXXXXXXXX 182
           S+ +   MW  H  YE+ +SVLD+LMRAF+K +M  + L ++ KMRE G+ P        
Sbjct: 200 SKNLAAFMWEGHRVYESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISIL 259

Query: 183 XXXXXGRGEFGLVWSLFRDMIGKGPRPSNYTFNVMILGFCKRGNVRVAESILHVMSK 353
                  G+ G VW LF D++ KGP P+N+TFN++IL FC++G  R+ E++LHVM K
Sbjct: 260 FRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGK 316


>ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/117 (43%), Positives = 74/117 (63%)
 Frame = +3

Query: 3   SQEIIDLMWSDHLDYETGFSVLDSLMRAFLKVDMIKQVLLVVGKMREEGLKPXXXXXXXX 182
           S+ +   MW  H  YE+ FSVLD+LM+AF+K +M  + L ++ KMRE G+ P        
Sbjct: 169 SKNLAAFMWEGHRVYESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISIL 228

Query: 183 XXXXXGRGEFGLVWSLFRDMIGKGPRPSNYTFNVMILGFCKRGNVRVAESILHVMSK 353
                  G+ G VW LF D++ KGP P+N+TFN++IL FC++G  R+ E++LHVM K
Sbjct: 229 FRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGK 285