BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031463
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
emb|CBI29241.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
gb|AEP33762.1| organelle transcript processing 82, partial [Hesp...    99   3e-19
gb|AEP33767.1| organelle transcript processing 82, partial [Matt...    97   1e-18

>ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 584

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/112 (58%), Positives = 88/112 (78%), Gaps = 2/112 (1%)
 Frame = -3

Query: 401 KLHGFTTVGDDVMRHLQNLAPEDGGCYVLLSNIYADVNQWDKVVEMRKMMKGMRVEKKIP 222
           K+HG+T VG+DV+ ++Q L  EDGGCYVLLSNI+A  +QW++V + RKMMK M VEKKIP
Sbjct: 469 KVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIP 528

Query: 221 GCSFIEVNSVVHEFLVDDKLHPSWRELCVIIDRLSTHLEFEGYE--ESLLAY 72
           G S IE++SVVH+F  +D+LH  WRE+  +I+RL+THLE +GYE   SL+ Y
Sbjct: 529 GYSSIELDSVVHDFFAEDRLHSKWREVSTVIERLNTHLEVKGYEANPSLVLY 580


>emb|CBI29241.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  100 bits (248), Expect = 2e-19
 Identities = 54/134 (40%), Positives = 78/134 (58%), Gaps = 3/134 (2%)
 Frame = -3

Query: 401 KLHGFTTVGDDVMRHLQNLAPEDGGCYVLLSNIYADVNQWDKVVEMRKMMKGMRVEKKIP 222
           K+HG   +G  V  HL  LAP D G YV LSNIYA +  W+ V ++R MMK M V +K P
Sbjct: 322 KMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDV-RKDP 380

Query: 221 GCSFIEVNSVVHEFLVDDKLHPSWRELCVIIDRLSTHLEFEGYEES---LLAYMNVEPDI 51
           GCS+IE++ V+HEFLV+D  HP  +++  ++  +S +L   GY  +   +L  M+ E   
Sbjct: 381 GCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKE 440

Query: 50  QHLSLERRKFRSSF 9
             L+    K   +F
Sbjct: 441 SSLNYHSEKIAIAF 454


>ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  100 bits (248), Expect = 2e-19
 Identities = 54/134 (40%), Positives = 78/134 (58%), Gaps = 3/134 (2%)
 Frame = -3

Query: 401 KLHGFTTVGDDVMRHLQNLAPEDGGCYVLLSNIYADVNQWDKVVEMRKMMKGMRVEKKIP 222
           K+HG   +G  V  HL  LAP D G YV LSNIYA +  W+ V ++R MMK M V +K P
Sbjct: 439 KMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDV-RKDP 497

Query: 221 GCSFIEVNSVVHEFLVDDKLHPSWRELCVIIDRLSTHLEFEGYEES---LLAYMNVEPDI 51
           GCS+IE++ V+HEFLV+D  HP  +++  ++  +S +L   GY  +   +L  M+ E   
Sbjct: 498 GCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKE 557

Query: 50  QHLSLERRKFRSSF 9
             L+    K   +F
Sbjct: 558 SSLNYHSEKIAIAF 571


>gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/103 (42%), Positives = 70/103 (67%)
 Frame = -3

Query: 401 KLHGFTTVGDDVMRHLQNLAPEDGGCYVLLSNIYADVNQWDKVVEMRKMMKGMRVEKKIP 222
           K+HG   +G+   + L  + PE+ G YVLLSNIYA   +W++V ++R ++    ++KK+P
Sbjct: 493 KIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVP 552

Query: 221 GCSFIEVNSVVHEFLVDDKLHPSWRELCVIIDRLSTHLEFEGY 93
           GCS IE++SVVHEF++ DKLHP  RE+  +++ +   LE  G+
Sbjct: 553 GCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGF 595


>gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 43/103 (41%), Positives = 69/103 (66%)
 Frame = -3

Query: 401 KLHGFTTVGDDVMRHLQNLAPEDGGCYVLLSNIYADVNQWDKVVEMRKMMKGMRVEKKIP 222
           K+HG   +G+   + L  + P + G YVLLSNIYA   +W++V ++R ++    ++KK+P
Sbjct: 507 KIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVP 566

Query: 221 GCSFIEVNSVVHEFLVDDKLHPSWRELCVIIDRLSTHLEFEGY 93
           GCS IE++SVVHEF++ DKLHP  RE+  +++ +   LE  G+
Sbjct: 567 GCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGF 609