BLASTX nr result

ID: Coptis21_contig00031451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031451
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [S...    56   4e-06
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    55   5e-06
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...    55   6e-06

>ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [Sorghum bicolor]
           gi|241918649|gb|EER91793.1| hypothetical protein
           SORBIDRAFT_01g026845 [Sorghum bicolor]
          Length = 295

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/76 (39%), Positives = 39/76 (51%)
 Frame = -1

Query: 231 MSILCWNCRDIGLDSTVMCLKDDIRNERPGIIFLCETKAGWFKSNNIIRKLGVYKSFIGP 52
           M IL WNCR +     V  L +  R E P ++FL ET     K  N+ RK+G  K  I  
Sbjct: 1   MKILAWNCRGLASHRAVRALLEVQRRENPDVLFLSETHLSKAKVENLKRKVGCEKFAIHE 60

Query: 51  ARGLSRGLWLLWDIEI 4
           + G S GL +LW  E+
Sbjct: 61  SDGRSGGLLMLWKKEV 76


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = -1

Query: 234 AMSILCWNCRDIGLDSTVMCLKDDIRNERPGIIFLCETKAGWFKSNNIIRKLGVYKSFIG 55
           AMS L WNCR +G  +TV  L+  I+     ++FLCET+    K + + RKL  ++ F+G
Sbjct: 635 AMSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKL-AFRGFVG 693

Query: 54  -PARGLSRGLWLLWD 13
             + G S GL L WD
Sbjct: 694 VSSEGKSGGLALYWD 708


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/76 (35%), Positives = 42/76 (55%)
 Frame = -1

Query: 231 MSILCWNCRDIGLDSTVMCLKDDIRNERPGIIFLCETKAGWFKSNNIIRKLGVYKSFIGP 52
           M  LCWNCR IG  +TV  L+D  ++  P ++F+ ET+   ++  N+   L    SF   
Sbjct: 1   MKTLCWNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVN 60

Query: 51  ARGLSRGLWLLWDIEI 4
           + G S GL L W+ ++
Sbjct: 61  SSGRSGGLGLFWNNDV 76


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