BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031446
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19924.3| unnamed protein product [Vitis vinifera]              192   2e-47
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
ref|XP_002530092.1| pentatricopeptide repeat-containing protein,...   164   7e-39
ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37

>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  192 bits (489), Expect = 2e-47
 Identities = 93/127 (73%), Positives = 109/127 (85%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WNAMITAY+Q G  E AL +F  M+R G+ ANEITFASVLGSCA+VL +++S+Q+HGL+
Sbjct: 128 SWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLSKQIHGLI 187

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIVRRYLEVDNYEEAV 25
           VKYGFC+NVIL SSLVDIYGKC  M DARRMF EI NPNAISWNVIVRRYLE+ N +EAV
Sbjct: 188 VKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAV 247

Query: 24  VMFFKMV 4
           VMFFKM+
Sbjct: 248 VMFFKMI 254



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/126 (30%), Positives = 75/126 (59%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WN ++  Y + G+ + A+++F++M R+ +     TF++ L +C+S+  +    Q+HG+ 
Sbjct: 229 SWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVA 288

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIVRRYLEVDNYEEAV 25
           ++ G+  + +++SSL+D+Y KC  ++ A R+F    + N ISW  IV  Y       EA 
Sbjct: 289 IRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREAR 348

Query: 24  VMFFKM 7
           V+F +M
Sbjct: 349 VLFDEM 354



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/127 (29%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WNAM+  Y+     E AL   + M ++    + +T   +L  CA + D+   +QVHG +
Sbjct: 361 SWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGFI 420

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRN-PNAISWNVIVRRYLEVDNYEEA 28
            ++G   N+ + ++L+ +YGKC  +   R  FY++ +  + ISWN ++  +      EEA
Sbjct: 421 YRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEA 480

Query: 27  VVMFFKM 7
           + +F +M
Sbjct: 481 MTIFGEM 487



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/107 (28%), Positives = 67/107 (62%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WNA++T+++++G  E A+ +F EM       ++ T  ++L +CA++  +   +Q+HG +
Sbjct: 463 SWNALLTSHARHGLSEEAMTIFGEMQWE-TTPSKFTLGTLLSACANIFALEQGKQIHGFM 521

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIV 64
           ++ G+  +V+   +LVD+Y KC  ++ A ++F E  + + I WN ++
Sbjct: 522 IRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMI 568


>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Vitis vinifera]
          Length = 711

 Score =  192 bits (489), Expect = 2e-47
 Identities = 93/127 (73%), Positives = 109/127 (85%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WNAMITAY+Q G  E AL +F  M+R G+ ANEITFASVLGSCA+VL +++S+Q+HGL+
Sbjct: 128 SWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLSKQIHGLI 187

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIVRRYLEVDNYEEAV 25
           VKYGFC+NVIL SSLVDIYGKC  M DARRMF EI NPNAISWNVIVRRYLE+ N +EAV
Sbjct: 188 VKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAV 247

Query: 24  VMFFKMV 4
           VMFFKM+
Sbjct: 248 VMFFKMI 254



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/126 (30%), Positives = 75/126 (59%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WN ++  Y + G+ + A+++F++M R+ +     TF++ L +C+S+  +    Q+HG+ 
Sbjct: 229 SWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVA 288

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIVRRYLEVDNYEEAV 25
           ++ G+  + +++SSL+D+Y KC  ++ A R+F    + N ISW  IV  Y       EA 
Sbjct: 289 IRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREAR 348

Query: 24  VMFFKM 7
           V+F +M
Sbjct: 349 VLFDEM 354



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/127 (29%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WNAM+  Y+     E AL   + M ++    + +T   +L  CA + D+   +QVHG +
Sbjct: 361 SWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGFI 420

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRN-PNAISWNVIVRRYLEVDNYEEA 28
            ++G   N+ + ++L+ +YGKC  +   R  FY++ +  + ISWN ++  +      EEA
Sbjct: 421 YRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEA 480

Query: 27  VVMFFKM 7
           + +F +M
Sbjct: 481 MTIFGEM 487



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/107 (28%), Positives = 67/107 (62%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WNA++T+++++G  E A+ +F EM       ++ T  ++L +CA++  +   +Q+HG +
Sbjct: 463 SWNALLTSHARHGLSEEAMTIFGEMQWE-TTPSKFTLGTLLSACANIFALEQGKQIHGFM 521

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIV 64
           ++ G+  +V+   +LVD+Y KC  ++ A ++F E  + + I WN ++
Sbjct: 522 IRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMI 568


>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 718

 Score =  164 bits (415), Expect = 7e-39
 Identities = 81/126 (64%), Positives = 99/126 (78%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WNA+I AY+Q G  E AL +F +M++ GV ANEITFASVL SC+ VLD+ +SRQ+HGL+
Sbjct: 125 SWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEITFASVLKSCSDVLDLSLSRQIHGLI 184

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIVRRYLEVDNYEEAV 25
           VK GFC NVIL S+LVD+YGKC  M +AR MF EI N N ++WNVIVRRYL+V N  EAV
Sbjct: 185 VKCGFCGNVILGSALVDVYGKCKVMSEARLMFNEIENCNDVTWNVIVRRYLDVGNEREAV 244

Query: 24  VMFFKM 7
            MFFKM
Sbjct: 245 KMFFKM 250



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/127 (31%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WNAM+  Y ++   E AL     M R+    + IT   +L  CA + D+ + +Q HG +
Sbjct: 358 SWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCAGISDVEMGKQAHGFI 417

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEI-RNPNAISWNVIVRRYLEVDNYEEA 28
            ++GF   +++ ++L+D+YGKC  +  AR  FY++ ++ + ISWN ++  Y      E+A
Sbjct: 418 YRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDNISWNALLTSYARHHQSEQA 477

Query: 27  VVMFFKM 7
           +++F +M
Sbjct: 478 MMIFGEM 484



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/126 (26%), Positives = 72/126 (57%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WNA++T+Y+++   E A+++F EM       +  TF ++L +CA++  +   +++HG +
Sbjct: 460 SWNALLTSYARHHQSEQAMMIFGEMQWE-TKPSTFTFGTLLAACANIFALDQGKEIHGFM 518

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIVRRYLEVDNYEEAV 25
           ++ G+  + +++ +LVD+Y KC  +  A  +F    + + I WN I+         +E +
Sbjct: 519 IRNGYNLDTVISGALVDMYSKCRCLSYALTVFNRAGSRDVILWNSIILGCCHNGRGKEVL 578

Query: 24  VMFFKM 7
            +F +M
Sbjct: 579 KLFGQM 584



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/126 (28%), Positives = 67/126 (53%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           TWN ++  Y   G+   A+ +F++M ++ V     TF++ L +C+++  +    Q+H   
Sbjct: 226 TWNVIVRRYLDVGNEREAVKMFFKMFQTDVRPLNFTFSNALIACSAMRALNEGMQIHAFA 285

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIVRRYLEVDNYEEAV 25
           +K  F  +  ++SSL ++Y KC  ++ AR +F +  + + ISW  +V  Y       EA 
Sbjct: 286 IKIKFEEDEAVSSSLSNMYAKCGKLESARMIFDQHGSRDVISWTSMVSAYALSGRTREAR 345

Query: 24  VMFFKM 7
            +F KM
Sbjct: 346 ELFEKM 351


>ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|222843933|gb|EEE81480.1|
           predicted protein [Populus trichocarpa]
          Length = 709

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/126 (61%), Positives = 97/126 (76%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WNAMI A  Q    E AL  F +MH+ GV ANE+TF+S L +C  VL++ +SRQ+HGL+
Sbjct: 125 SWNAMIRACLQCVRPEKALSYFGDMHKQGVYANEVTFSSALRACGDVLELCLSRQIHGLI 184

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIVRRYLEVDNYEEAV 25
           VKYGFC NVI+ SSLVD+YGKC  M ++RR+F EI NPN ++WN+IVRRYLEV +  EAV
Sbjct: 185 VKYGFCGNVIVGSSLVDVYGKCGAMSESRRIFDEIENPNNVTWNIIVRRYLEVGDENEAV 244

Query: 24  VMFFKM 7
           VMFFKM
Sbjct: 245 VMFFKM 250



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/126 (30%), Positives = 69/126 (54%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           TWN ++  Y + GD   A+++F++M R+ +     TF++ L +C+ +  +    Q+HG+ 
Sbjct: 226 TWNIIVRRYLEVGDENEAVVMFFKMFRAKLRPLSYTFSNALVACSDMRAVKEGMQIHGVA 285

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIVRRYLEVDNYEEAV 25
            K  F    ++ SSL+D+Y KC  ++ ARR+F    + + ISW  +V  Y       EA 
Sbjct: 286 TKINFEEEEVVLSSLIDMYVKCGEIESARRVFDLPGSRDLISWTSMVSAYAMSGRMREAR 345

Query: 24  VMFFKM 7
            +F +M
Sbjct: 346 ELFDEM 351



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/127 (28%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           ++NA++  Y ++   E AL   + M R+    + ITF  +L  C+ + D+ + +QVHG +
Sbjct: 358 SYNALLAGYIRSLQWEEALDFVYLMCRTTENIDHITFQLMLNVCSGLSDVDMGKQVHGFI 417

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIR-NPNAISWNVIVRRYLEVDNYEEA 28
            ++G+  N ++ ++L+D+Y KC  +  A   F++++ + +++SWNV++  Y      E+A
Sbjct: 418 YRHGWLSNTVIGNALLDMYCKCGNLRSAGVWFHQMKQSRDSVSWNVLLTSYARRQMSEQA 477

Query: 27  VVMFFKM 7
           + +F +M
Sbjct: 478 MSIFREM 484



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/107 (27%), Positives = 63/107 (58%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WN ++T+Y++    E A+ +F EM       ++  FA++L +CA+   +   +Q+HG +
Sbjct: 460 SWNVLLTSYARRQMSEQAMSIFREMQWE-TKPHKFIFATLLAACANTFALDQGKQIHGFM 518

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIV 64
           ++ G+  + ++A +L+D+Y KC  ++ A  +F E    + + WN ++
Sbjct: 519 IRNGYDIDTVIAGALLDMYSKCRCLEYALIVFREADKRDLVLWNSMI 565


>ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Cucumis sativus]
           gi|449521874|ref|XP_004167954.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g26540-like [Cucumis sativus]
          Length = 697

 Score =  159 bits (403), Expect = 2e-37
 Identities = 79/126 (62%), Positives = 99/126 (78%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WNAMITAY+QNG    AL ++ ++++SGV A E+T AS+L SC SVL ++ SRQ+HG +
Sbjct: 127 SWNAMITAYTQNGYALEALNLYLDLNKSGVYATEVTLASILRSCGSVLALHFSRQIHGHI 186

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIVRRYLEVDNYEEAV 25
           VK GF  NVIL SSLVD+YGKC  M+DAR MF EI+N N +SWNVIVRRYLEV N +EAV
Sbjct: 187 VKCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVGNGKEAV 246

Query: 24  VMFFKM 7
            MFF+M
Sbjct: 247 SMFFQM 252



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/126 (30%), Positives = 76/126 (60%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WN ++  Y + G+G+ A+ +F++M R  ++ +  TF++ L +C+ +  +    Q+HG+V
Sbjct: 228 SWNVIVRRYLEVGNGKEAVSMFFQMFRESLMPSSFTFSNALIACSRMAALIEGGQIHGIV 287

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIVRRYLEVDNYEEAV 25
           VK G   N +++SSL+D+Y KC  + +A ++F +  + N ISW  +V  Y    +  +A 
Sbjct: 288 VKVGLEENEVISSSLIDMYVKCGTLANAHQVFTQPSSRNLISWTSMVYAYATSGDVLKAR 347

Query: 24  VMFFKM 7
            +F +M
Sbjct: 348 ELFNEM 353



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/107 (32%), Positives = 68/107 (63%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WNA++TA++++G  E A+ +F EM       N  TFA++LG+CA++  +   +Q+HG +
Sbjct: 462 SWNALLTAHARHGMSEQAMTIFSEMQLE-TDPNNFTFATLLGACANMFALEHGKQIHGFM 520

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRNPNAISWNVIV 64
           V+  +  +++L  +LVD+Y KC  +  A ++F  + + + + WN I+
Sbjct: 521 VRNNYAIDIVLTGALVDMYCKCRELKYALKVFEHVASRDVVLWNSII 567



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
 Frame = -1

Query: 384 TWNAMITAYSQNGDGENALLVFWEMHRSGVLANEITFASVLGSCASVLDIYVSRQVHGLV 205
           +WNAM+  Y  +   E AL     M  S    +  T   +L  C    D+   +QVHG V
Sbjct: 360 SWNAMLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFV 419

Query: 204 VKYGFCFNVILASSLVDIYGKCWFMDDARRMFYEIRN-PNAISWNVIVRRYLEVDNYEEA 28
            + GF  N+ + ++L+D+YGKC  +  A+  FY++    + +SWN ++  +      E+A
Sbjct: 420 YRTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQA 479

Query: 27  VVMFFKM 7
           + +F +M
Sbjct: 480 MTIFSEM 486