BLASTX nr result

ID: Coptis21_contig00031444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031444
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615721.1| NBS-LRR resistance protein [Medicago truncat...    64   1e-08
ref|XP_003613342.1| Nbs-lrr resistance protein [Medicago truncat...    63   3e-08
ref|XP_002301661.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichoca...    62   4e-08
ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>ref|XP_003615721.1| NBS-LRR resistance protein [Medicago truncatula]
            gi|355517056|gb|AES98679.1| NBS-LRR resistance protein
            [Medicago truncatula]
          Length = 988

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = -1

Query: 275  GLTALQSLKIYRCKNLRMLPEGLQHLTYLHSLEIFKCHLDLHERVKE-KGEDWPKLFHIQ 99
            GL +L++L+IY C+ LR LPEG++HLT L  L I  C   L ER KE  GEDW K+ HI 
Sbjct: 925  GLQSLRTLQIYSCEGLRCLPEGIRHLTSLELLTIINCP-TLEERCKEGTGEDWDKIAHIP 983

Query: 98   NLSIR 84
            N+  +
Sbjct: 984  NIQFK 988


>ref|XP_003613342.1| Nbs-lrr resistance protein [Medicago truncatula]
            gi|355514677|gb|AES96300.1| Nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 1140

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = -1

Query: 302  NLWIIPKILG-LTALQSLKIYRCKNLRMLPEGLQHLTYLHSLEIFKCHLDLHERVK-EKG 129
            NL  +   LG L++LQ L+IY+C  L  LP  +Q LT L SL+I  CH +L +R K E G
Sbjct: 928  NLISLSDSLGNLSSLQGLEIYKCPKLICLPASIQSLTALKSLDICDCH-ELEKRCKRETG 986

Query: 128  EDWPKLFHIQNL 93
            EDWPK+ HIQ L
Sbjct: 987  EDWPKISHIQYL 998


>ref|XP_002301661.1| predicted protein [Populus trichocarpa] gi|222843387|gb|EEE80934.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = -1

Query: 272 LTALQSLKIYRCKNLRMLPEGLQHLTYLHSLEIFKCHLDLHERV-KEKGEDWPKLFHIQN 96
           LTAL+ L +YRC  L  LP+ +QHLT L SL I+ C  +L +R  KE+G+DWPK+ HI +
Sbjct: 565 LTALEYLGLYRCPELNSLPDSIQHLTSLLSLVIYDCP-NLEKRCEKERGKDWPKIAHIPD 623

Query: 95  LSI 87
           + I
Sbjct: 624 IEI 626


>ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844655|gb|EEE82202.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1063

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/62 (48%), Positives = 38/62 (61%)
 Frame = -1

Query: 272  LTALQSLKIYRCKNLRMLPEGLQHLTYLHSLEIFKCHLDLHERVKEKGEDWPKLFHIQNL 93
            LTAL++L +Y C  L  LPE +QHLT L SL I  C        K+ GEDWPK+ HI+ +
Sbjct: 1001 LTALENLSLYNCPELNSLPESIQHLTSLQSLSIVGCPNLKKRCEKDLGEDWPKIAHIRKI 1060

Query: 92   SI 87
             I
Sbjct: 1061 RI 1062


>ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|222844654|gb|EEE82201.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
 Frame = -1

Query: 272 LTALQSLKIYRCKNLRMLPEGLQHLTYLHSLEIFKCHLDLHERV-KEKGEDWPKLFHIQN 96
           LTAL+ L++  C  L  LPE +QHLT L SL I+KC  +L +R  K+ GEDWPK+ HI  
Sbjct: 411 LTALEDLELGNCPELNSLPESIQHLTSLQSLSIWKCP-NLEKRCEKDLGEDWPKIAHIPQ 469

Query: 95  LS 90
           +S
Sbjct: 470 IS 471


Top