BLASTX nr result

ID: Coptis21_contig00031441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031441
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40584.3| unnamed protein product [Vitis vinifera]              365   6e-99
ref|XP_002264541.1| PREDICTED: bifunctional fucokinase/fucose py...   362   5e-98
ref|XP_004134296.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional...   358   7e-97
ref|XP_002892082.1| hypothetical protein ARALYDRAFT_470155 [Arab...   350   2e-94
gb|AAF97333.1|AC023628_14 Hypothetical protein [Arabidopsis thal...   348   1e-93

>emb|CBI40584.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  365 bits (937), Expect = 6e-99
 Identities = 184/262 (70%), Positives = 210/262 (80%), Gaps = 12/262 (4%)
 Frame = -1

Query: 752 EMSRKGEKIDVSKILRKSWYHLRLSVRDSNRVPTWDAIILTAASSEQAQLYEWQLNRAKR 573
           E  R   K+D++ ILRKSWY LRLSVR  +RVPTWDAI+LTAAS EQA+LYEWQL RAKR
Sbjct: 2   ESRRSRAKVDLTGILRKSWYRLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLKRAKR 61

Query: 572 MGRIATSTITLAVPDPHGARIGSGAATLNALLALSRFFQ--NQQVENY----------RX 429
           +GRIA+ST+TL VPDP G RIGSG ATLNA+ AL+R  +    QVEN             
Sbjct: 62  LGRIASSTVTLVVPDPDGNRIGSGGATLNAIYALARHLEALGPQVENMDTGSSESSVPHE 121

Query: 428 XXXXXXXXXSVITFLTNKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLL 249
                     +++F+  +HILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLL
Sbjct: 122 RSNSEVSFSPMVSFMAKRHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLL 181

Query: 248 FDHILAISSCARQAFKNKGGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHG 69
           FDHILAIS CARQAFKN+GG+FIMTGDVLPCFDASTMVLPED+SCIITVP+TLD+ASNHG
Sbjct: 182 FDHILAISCCARQAFKNEGGIFIMTGDVLPCFDASTMVLPEDTSCIITVPLTLDIASNHG 241

Query: 68  VIVASNTGTVDKTYSLSLVQNL 3
           VIVAS TG ++KT  +SLV+NL
Sbjct: 242 VIVASKTGILNKTSYVSLVENL 263


>ref|XP_002264541.1| PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like
           [Vitis vinifera]
          Length = 1079

 Score =  362 bits (929), Expect = 5e-98
 Identities = 182/260 (70%), Positives = 209/260 (80%), Gaps = 10/260 (3%)
 Frame = -1

Query: 752 EMSRKGEKIDVSKILRKSWYHLRLSVRDSNRVPTWDAIILTAASSEQAQLYEWQLNRAKR 573
           E  R   K+D++ ILRKSWY LRLSVR  +RVPTWDAI+LTAAS EQA+LYEWQL RAKR
Sbjct: 2   ESRRSRAKVDLTGILRKSWYRLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLKRAKR 61

Query: 572 MGRIATSTITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENY----------RXXX 423
           +GRIA+ST+TL VPDP G RIGSG ATLNA+ AL+R  +   +EN               
Sbjct: 62  LGRIASSTVTLVVPDPDGNRIGSGGATLNAIYALARHLE--ALENMDTGSSESSVPHERS 119

Query: 422 XXXXXXXSVITFLTNKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFD 243
                   +++F+  +HILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFD
Sbjct: 120 NSEVSFSPMVSFMAKRHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFD 179

Query: 242 HILAISSCARQAFKNKGGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHGVI 63
           HILAIS CARQAFKN+GG+FIMTGDVLPCFDASTMVLPED+SCIITVP+TLD+ASNHGVI
Sbjct: 180 HILAISCCARQAFKNEGGIFIMTGDVLPCFDASTMVLPEDTSCIITVPLTLDIASNHGVI 239

Query: 62  VASNTGTVDKTYSLSLVQNL 3
           VAS TG ++KT  +SLV+NL
Sbjct: 240 VASKTGILNKTSYVSLVENL 259


>ref|XP_004134296.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional fucokinase/fucose
           pyrophosphorylase-like [Cucumis sativus]
           gi|449478213|ref|XP_004155252.1| PREDICTED: LOW QUALITY
           PROTEIN: bifunctional fucokinase/fucose
           pyrophosphorylase-like [Cucumis sativus]
          Length = 1065

 Score =  358 bits (919), Expect = 7e-97
 Identities = 183/262 (69%), Positives = 210/262 (80%), Gaps = 9/262 (3%)
 Frame = -1

Query: 761 VKTEMSR-KGEKIDVSKILRKSWYHLRLSVRDSNRVPTWDAIILTAASSEQAQLYEWQLN 585
           +++ +SR + +K D+  ILRKSWYHLRLSVR  +RVPTWDAI+LTAAS EQAQLYEWQLN
Sbjct: 1   MESRVSRTRQKKADLHSILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAQLYEWQLN 60

Query: 584 RAKRMGRIATSTITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENY--------RX 429
           RAKR+GRIA STITLAVPDP G RIGSGAATLNA+ AL++ + N  + +         R 
Sbjct: 61  RAKRIGRIAHSTITLAVPDPDGQRIGSGAATLNAIYALAKHYHNLGLVHSTEVSFISARS 120

Query: 428 XXXXXXXXXSVITFLTNKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLL 249
                      + F + KHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLL
Sbjct: 121 KPRFXASALLWLCFTSKKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLL 180

Query: 248 FDHILAISSCARQAFKNKGGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHG 69
           FDHILAI+SCARQAFKN+GG+  MTGDVLPCFDAS ++LPE+ SCIITVPITLD+ASNHG
Sbjct: 181 FDHILAIASCARQAFKNEGGILTMTGDVLPCFDASALILPEEDSCIITVPITLDIASNHG 240

Query: 68  VIVASNTGTVDKTYSLSLVQNL 3
           VIVAS   T  + Y+LSLV NL
Sbjct: 241 VIVASKNETAGRGYTLSLVDNL 262


>ref|XP_002892082.1| hypothetical protein ARALYDRAFT_470155 [Arabidopsis lyrata subsp.
           lyrata] gi|297337924|gb|EFH68341.1| hypothetical protein
           ARALYDRAFT_470155 [Arabidopsis lyrata subsp. lyrata]
          Length = 1055

 Score =  350 bits (898), Expect = 2e-94
 Identities = 172/249 (69%), Positives = 207/249 (83%)
 Frame = -1

Query: 749 MSRKGEKIDVSKILRKSWYHLRLSVRDSNRVPTWDAIILTAASSEQAQLYEWQLNRAKRM 570
           MS++ +K D++ +LRKSWYHLRLSVR   RVPTWDAI+LTAAS EQA+LYEWQL RAKRM
Sbjct: 1   MSKQRKKADLATVLRKSWYHLRLSVRHPTRVPTWDAIVLTAASPEQAELYEWQLRRAKRM 60

Query: 569 GRIATSTITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENYRXXXXXXXXXXSVIT 390
           GRIA+ST+TLAVPDP G RIGSGAATLNA+ AL+R ++    +              V  
Sbjct: 61  GRIASSTVTLAVPDPDGKRIGSGAATLNAIYALARHYEKLGFDPGPEVEVANGTCKWV-R 119

Query: 389 FLTNKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQ 210
           FL+ KH+L+LHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAI+SCARQ
Sbjct: 120 FLSAKHVLMLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAIASCARQ 179

Query: 209 AFKNKGGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHGVIVASNTGTVDKT 30
           AF+++GG+FIMTGDVLPCFDA  M LPED++ I+TVPITLD+ASNHGVIV S + ++ ++
Sbjct: 180 AFRDQGGLFIMTGDVLPCFDAFRMTLPEDAASIVTVPITLDIASNHGVIVTSKSESLAES 239

Query: 29  YSLSLVQNL 3
           Y++SLV +L
Sbjct: 240 YTVSLVNDL 248


>gb|AAF97333.1|AC023628_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1113

 Score =  348 bits (892), Expect = 1e-93
 Identities = 169/249 (67%), Positives = 207/249 (83%)
 Frame = -1

Query: 749 MSRKGEKIDVSKILRKSWYHLRLSVRDSNRVPTWDAIILTAASSEQAQLYEWQLNRAKRM 570
           MS++ +K D++ +LRKSWYHLRLSVR   RVPTWDAI+LTAAS EQA+LY+WQL RAKRM
Sbjct: 1   MSKQRKKADLATVLRKSWYHLRLSVRHPTRVPTWDAIVLTAASPEQAELYDWQLRRAKRM 60

Query: 569 GRIATSTITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENYRXXXXXXXXXXSVIT 390
           GRIA+ST+TLAVPDP G RIGSGAATLNA+ AL+R ++    +               + 
Sbjct: 61  GRIASSTVTLAVPDPDGKRIGSGAATLNAIYALARHYEKLGFD-LGPEMEVANGACKWVR 119

Query: 389 FLTNKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQ 210
           F++ KH+L+LHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAI+SCARQ
Sbjct: 120 FISAKHVLMLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAIASCARQ 179

Query: 209 AFKNKGGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHGVIVASNTGTVDKT 30
           AF+++GG+FIMTGDVLPCFDA  M LPED++ I+TVPITLD+ASNHGVIV S + ++ ++
Sbjct: 180 AFQDQGGLFIMTGDVLPCFDAFKMTLPEDAASIVTVPITLDIASNHGVIVTSKSESLAES 239

Query: 29  YSLSLVQNL 3
           Y++SLV +L
Sbjct: 240 YTVSLVNDL 248


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