BLASTX nr result

ID: Coptis21_contig00031408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031408
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524573.1| conserved hypothetical protein [Ricinus comm...    76   2e-12
ref|XP_002337903.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
dbj|BAJ87721.1| predicted protein [Hordeum vulgare subsp. vulgare]     74   1e-11
ref|XP_002531112.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|NP_001143807.1| uncharacterized protein LOC100276581 [Zea ma...    74   2e-11

>ref|XP_002524573.1| conserved hypothetical protein [Ricinus communis]
           gi|223536126|gb|EEF37781.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 262

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 16/102 (15%)
 Frame = +2

Query: 11  TMEPRRVPLKSHN-----PNWKEKLRDNCFKRIRQDRNNLLWKMRAPS---QPSHKEVME 166
           T  P+R  +K+ +     P WK+KLR+NC+KR+R+DRN LLWKMR P+     S K+ ++
Sbjct: 11  TPPPKRQSIKTQSHFNTYPLWKDKLRENCYKRVREDRNRLLWKMRLPTPNKSISDKDFIK 70

Query: 167 LTFRDIVTDELKRIK--------XXXXXXXXXXXXLWEYDGL 268
             F++IV+DELK+++                    LWEYDGL
Sbjct: 71  SAFQNIVSDELKKMRHSSLDADLKIPTSAPDPSDILWEYDGL 112


>ref|XP_002337903.1| predicted protein [Populus trichocarpa] gi|222869991|gb|EEF07122.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 14/87 (16%)
 Frame = +2

Query: 50  PNWKEKLRDNCFKRIRQDRNNLLWKMRAPSQPS--HKEVMELTFRDIVTDELKRI----- 208
           P+WK KLR+NC+KR+R+DR  LLWKMR P+  S  +K++++   +DIV+DEL++I     
Sbjct: 28  PSWKNKLRENCYKRVREDRTRLLWKMRLPTAKSLDNKDIIKYALQDIVSDELEKIKNSSS 87

Query: 209 -------KXXXXXXXXXXXXLWEYDGL 268
                  K            LWEYDGL
Sbjct: 88  SSLNEQLKIPTRALEANDDMLWEYDGL 114


>dbj|BAJ87721.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 240

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
 Frame = +2

Query: 20  PRRVPLKSHNPNWKEKLRDNCFKRIRQDRNNLLWKMRAPSQP--SHKEVMELTFRDIVTD 193
           PRRVP KS  P+W+E+LR NC  R++ +R +LLWKMR   QP  +  +  E   R+I++D
Sbjct: 6   PRRVPNKSRRPDWREELRANCMTRVKNERVHLLWKMRNQGQPPATDMKTAESAVRNIISD 65

Query: 194 ELKRIK-XXXXXXXXXXXXLWEYDGLQK 274
           E+K++K             +WEY+G Q+
Sbjct: 66  EVKKLKRCVDGKKDQEVDMIWEYEGPQE 93


>ref|XP_002531112.1| conserved hypothetical protein [Ricinus communis]
           gi|223529308|gb|EEF31277.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 308

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 16/102 (15%)
 Frame = +2

Query: 11  TMEPRRVPLKSHN-----PNWKEKLRDNCFKRIRQDRNNLLWKMRAPS---QPSHKEVME 166
           T  P+R  +K+ +     P WK+KLR+NC+KR+R+DRN LLWKMR P+     + K+ ++
Sbjct: 11  TPPPKRQSIKTQSHFNTYPLWKDKLRENCYKRVREDRNRLLWKMRLPTPNKSITDKDFIK 70

Query: 167 LTFRDIVTDELKRIK--------XXXXXXXXXXXXLWEYDGL 268
             F++IV+DELK+++                    LW+YDGL
Sbjct: 71  SAFQNIVSDELKKMRHSSLDADLKIPTSAPDPSDILWKYDGL 112


>ref|NP_001143807.1| uncharacterized protein LOC100276581 [Zea mays]
           gi|195627486|gb|ACG35573.1| hypothetical protein [Zea
           mays]
          Length = 156

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
 Frame = +2

Query: 20  PRRVPLKSHNPNWKEKLRDNCFKRIRQDRNNLLWKMRAPSQPSH-KEVMELTFRDIVTDE 196
           P RV +K+H P+WK +LR NC +R+R+DRN+LLWK+R    P +  E +    R +++DE
Sbjct: 6   PMRVSIKAHRPDWKSELRTNCLRRVRKDRNDLLWKIRKQGLPGNVMEKVRSAVRSVISDE 65

Query: 197 LKRIK-XXXXXXXXXXXXLWEYDGL 268
           ++++K             +WEY GL
Sbjct: 66  VEKLKQSNTENEDQEMDVIWEYQGL 90


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