BLASTX nr result
ID: Coptis21_contig00031408
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00031408 (313 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524573.1| conserved hypothetical protein [Ricinus comm... 76 2e-12 ref|XP_002337903.1| predicted protein [Populus trichocarpa] gi|2... 75 7e-12 dbj|BAJ87721.1| predicted protein [Hordeum vulgare subsp. vulgare] 74 1e-11 ref|XP_002531112.1| conserved hypothetical protein [Ricinus comm... 74 2e-11 ref|NP_001143807.1| uncharacterized protein LOC100276581 [Zea ma... 74 2e-11 >ref|XP_002524573.1| conserved hypothetical protein [Ricinus communis] gi|223536126|gb|EEF37781.1| conserved hypothetical protein [Ricinus communis] Length = 262 Score = 76.3 bits (186), Expect = 2e-12 Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 16/102 (15%) Frame = +2 Query: 11 TMEPRRVPLKSHN-----PNWKEKLRDNCFKRIRQDRNNLLWKMRAPS---QPSHKEVME 166 T P+R +K+ + P WK+KLR+NC+KR+R+DRN LLWKMR P+ S K+ ++ Sbjct: 11 TPPPKRQSIKTQSHFNTYPLWKDKLRENCYKRVREDRNRLLWKMRLPTPNKSISDKDFIK 70 Query: 167 LTFRDIVTDELKRIK--------XXXXXXXXXXXXLWEYDGL 268 F++IV+DELK+++ LWEYDGL Sbjct: 71 SAFQNIVSDELKKMRHSSLDADLKIPTSAPDPSDILWEYDGL 112 >ref|XP_002337903.1| predicted protein [Populus trichocarpa] gi|222869991|gb|EEF07122.1| predicted protein [Populus trichocarpa] Length = 144 Score = 74.7 bits (182), Expect = 7e-12 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 14/87 (16%) Frame = +2 Query: 50 PNWKEKLRDNCFKRIRQDRNNLLWKMRAPSQPS--HKEVMELTFRDIVTDELKRI----- 208 P+WK KLR+NC+KR+R+DR LLWKMR P+ S +K++++ +DIV+DEL++I Sbjct: 28 PSWKNKLRENCYKRVREDRTRLLWKMRLPTAKSLDNKDIIKYALQDIVSDELEKIKNSSS 87 Query: 209 -------KXXXXXXXXXXXXLWEYDGL 268 K LWEYDGL Sbjct: 88 SSLNEQLKIPTRALEANDDMLWEYDGL 114 >dbj|BAJ87721.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 240 Score = 73.9 bits (180), Expect = 1e-11 Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 3/88 (3%) Frame = +2 Query: 20 PRRVPLKSHNPNWKEKLRDNCFKRIRQDRNNLLWKMRAPSQP--SHKEVMELTFRDIVTD 193 PRRVP KS P+W+E+LR NC R++ +R +LLWKMR QP + + E R+I++D Sbjct: 6 PRRVPNKSRRPDWREELRANCMTRVKNERVHLLWKMRNQGQPPATDMKTAESAVRNIISD 65 Query: 194 ELKRIK-XXXXXXXXXXXXLWEYDGLQK 274 E+K++K +WEY+G Q+ Sbjct: 66 EVKKLKRCVDGKKDQEVDMIWEYEGPQE 93 >ref|XP_002531112.1| conserved hypothetical protein [Ricinus communis] gi|223529308|gb|EEF31277.1| conserved hypothetical protein [Ricinus communis] Length = 308 Score = 73.6 bits (179), Expect = 2e-11 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 16/102 (15%) Frame = +2 Query: 11 TMEPRRVPLKSHN-----PNWKEKLRDNCFKRIRQDRNNLLWKMRAPS---QPSHKEVME 166 T P+R +K+ + P WK+KLR+NC+KR+R+DRN LLWKMR P+ + K+ ++ Sbjct: 11 TPPPKRQSIKTQSHFNTYPLWKDKLRENCYKRVREDRNRLLWKMRLPTPNKSITDKDFIK 70 Query: 167 LTFRDIVTDELKRIK--------XXXXXXXXXXXXLWEYDGL 268 F++IV+DELK+++ LW+YDGL Sbjct: 71 SAFQNIVSDELKKMRHSSLDADLKIPTSAPDPSDILWKYDGL 112 >ref|NP_001143807.1| uncharacterized protein LOC100276581 [Zea mays] gi|195627486|gb|ACG35573.1| hypothetical protein [Zea mays] Length = 156 Score = 73.6 bits (179), Expect = 2e-11 Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 2/85 (2%) Frame = +2 Query: 20 PRRVPLKSHNPNWKEKLRDNCFKRIRQDRNNLLWKMRAPSQPSH-KEVMELTFRDIVTDE 196 P RV +K+H P+WK +LR NC +R+R+DRN+LLWK+R P + E + R +++DE Sbjct: 6 PMRVSIKAHRPDWKSELRTNCLRRVRKDRNDLLWKIRKQGLPGNVMEKVRSAVRSVISDE 65 Query: 197 LKRIK-XXXXXXXXXXXXLWEYDGL 268 ++++K +WEY GL Sbjct: 66 VEKLKQSNTENEDQEMDVIWEYQGL 90