BLASTX nr result
ID: Coptis21_contig00031391
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00031391
(1202 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig... 414 e-113
emb|CBI23000.3| unnamed protein product [Vitis vinifera] 414 e-113
ref|XP_002516937.1| nucleotide binding protein, putative [Ricinu... 407 e-111
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera] 402 e-109
ref|XP_002328632.1| predicted protein [Populus trichocarpa] gi|2... 397 e-108
>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
vinifera]
Length = 1339
Score = 414 bits (1065), Expect = e-113
Identities = 202/310 (65%), Positives = 250/310 (80%)
Frame = +1
Query: 1 LKVSEYFLPAQSRISCVHTQVLEAGYNCGVAASALIYYKGQLHSGHFDGSIKVWDIREQT 180
LK+++YFLP +S ISCVHTQ+LE G C A +ALIYY+GQL SG+ DGSIKVWDI+ Q+
Sbjct: 1031 LKIADYFLPYKSHISCVHTQILEMGRKCSGAVTALIYYRGQLCSGYSDGSIKVWDIKGQS 1090
Query: 181 ATLVWEVREHKKAVTCFTLSEPGDSLLSGSADRTIRVWQMVQRRLACVEVIETKEPIHKI 360
ATLV +++EH+KAVTCF+ EPGDSLLSGSAD+TIRVWQMV+R++ C EVI TKEP+ +
Sbjct: 1091 ATLVLDIKEHRKAVTCFSHFEPGDSLLSGSADKTIRVWQMVKRKMECTEVISTKEPVQNL 1150
Query: 361 ESYKESIFVLTQRRGVKVFDASRTVKRIYKSKHVKCMAVVQRKLYLGCKDSSIQEVDITN 540
+++ + IF +T GVKVFDASR VK I KSKHVKC+ VVQ +LY+GC DSSIQEV IT
Sbjct: 1151 DTHGQLIFTVTHGHGVKVFDASRKVKDICKSKHVKCVRVVQGRLYIGCMDSSIQEVVITR 1210
Query: 541 ERVKEIKAPNKRWWAKNKPINDILVYRDWLYSARGVLVEGLVLKERRKERNPQMSIPMEK 720
R +EI+AP K W +N+PIN I+VY+DWLYSA + VEG KE ++ PQMS+ +K
Sbjct: 1211 AREQEIRAPAKSWRMQNRPINSIVVYKDWLYSASDI-VEGSNFKEWKRHSKPQMSMVPDK 1269
Query: 721 GKRVQAMGVVEDFIYVNCSLSPSIIEIWLRSTQRKVGRLSAGSKITSILTANDIVLCGTD 900
G V AMG+VEDFIY+NCS S SI++IWLR TQ+K GRLSAGS+ITS+LTANDIVLCGT+
Sbjct: 1270 GASVLAMGIVEDFIYLNCSSSTSILQIWLRGTQQKAGRLSAGSRITSLLTANDIVLCGTE 1329
Query: 901 TGLIKGWIPL 930
GLIKGWIPL
Sbjct: 1330 MGLIKGWIPL 1339
>emb|CBI23000.3| unnamed protein product [Vitis vinifera]
Length = 1274
Score = 414 bits (1065), Expect = e-113
Identities = 202/310 (65%), Positives = 250/310 (80%)
Frame = +1
Query: 1 LKVSEYFLPAQSRISCVHTQVLEAGYNCGVAASALIYYKGQLHSGHFDGSIKVWDIREQT 180
LK+++YFLP +S ISCVHTQ+LE G C A +ALIYY+GQL SG+ DGSIKVWDI+ Q+
Sbjct: 966 LKIADYFLPYKSHISCVHTQILEMGRKCSGAVTALIYYRGQLCSGYSDGSIKVWDIKGQS 1025
Query: 181 ATLVWEVREHKKAVTCFTLSEPGDSLLSGSADRTIRVWQMVQRRLACVEVIETKEPIHKI 360
ATLV +++EH+KAVTCF+ EPGDSLLSGSAD+TIRVWQMV+R++ C EVI TKEP+ +
Sbjct: 1026 ATLVLDIKEHRKAVTCFSHFEPGDSLLSGSADKTIRVWQMVKRKMECTEVISTKEPVQNL 1085
Query: 361 ESYKESIFVLTQRRGVKVFDASRTVKRIYKSKHVKCMAVVQRKLYLGCKDSSIQEVDITN 540
+++ + IF +T GVKVFDASR VK I KSKHVKC+ VVQ +LY+GC DSSIQEV IT
Sbjct: 1086 DTHGQLIFTVTHGHGVKVFDASRKVKDICKSKHVKCVRVVQGRLYIGCMDSSIQEVVITR 1145
Query: 541 ERVKEIKAPNKRWWAKNKPINDILVYRDWLYSARGVLVEGLVLKERRKERNPQMSIPMEK 720
R +EI+AP K W +N+PIN I+VY+DWLYSA + VEG KE ++ PQMS+ +K
Sbjct: 1146 AREQEIRAPAKSWRMQNRPINSIVVYKDWLYSASDI-VEGSNFKEWKRHSKPQMSMVPDK 1204
Query: 721 GKRVQAMGVVEDFIYVNCSLSPSIIEIWLRSTQRKVGRLSAGSKITSILTANDIVLCGTD 900
G V AMG+VEDFIY+NCS S SI++IWLR TQ+K GRLSAGS+ITS+LTANDIVLCGT+
Sbjct: 1205 GASVLAMGIVEDFIYLNCSSSTSILQIWLRGTQQKAGRLSAGSRITSLLTANDIVLCGTE 1264
Query: 901 TGLIKGWIPL 930
GLIKGWIPL
Sbjct: 1265 MGLIKGWIPL 1274
>ref|XP_002516937.1| nucleotide binding protein, putative [Ricinus communis]
gi|223544025|gb|EEF45551.1| nucleotide binding protein,
putative [Ricinus communis]
Length = 1357
Score = 407 bits (1047), Expect = e-111
Identities = 197/309 (63%), Positives = 249/309 (80%)
Frame = +1
Query: 4 KVSEYFLPAQSRISCVHTQVLEAGYNCGVAASALIYYKGQLHSGHFDGSIKVWDIREQTA 183
+V+E++LP SRISCVHTQVLE ++ A +ALIY++GQL+SG+ DGSIKVWDI+ Q+A
Sbjct: 1050 RVAEFYLPNNSRISCVHTQVLETKHDRSGAVTALIYFRGQLYSGYSDGSIKVWDIKHQSA 1109
Query: 184 TLVWEVREHKKAVTCFTLSEPGDSLLSGSADRTIRVWQMVQRRLACVEVIETKEPIHKIE 363
TLVW+++EHKKAVTCF+L E G+ LLSGSAD+TIRVWQMV R+L CVEVI KEPI KIE
Sbjct: 1110 TLVWDLKEHKKAVTCFSLFELGERLLSGSADKTIRVWQMVNRKLECVEVIAMKEPIQKIE 1169
Query: 364 SYKESIFVLTQRRGVKVFDASRTVKRIYKSKHVKCMAVVQRKLYLGCKDSSIQEVDITNE 543
+Y +++F++TQ G+KV D+SRTVK + K+K KCM+ VQ KLY+GC DSSIQE+ +TN
Sbjct: 1170 TYGQTMFIITQGHGMKVLDSSRTVKDLCKNKKFKCMSAVQGKLYIGCTDSSIQELTMTNN 1229
Query: 544 RVKEIKAPNKRWWAKNKPINDILVYRDWLYSARGVLVEGLVLKERRKERNPQMSIPMEKG 723
R +EIK P K W +NKPIN I +++DWLYSA + VEG +KE R PQMSI +KG
Sbjct: 1230 REREIKPPMKSWMMQNKPINSIALHKDWLYSASSI-VEGSRVKELRTHSKPQMSIAPDKG 1288
Query: 724 KRVQAMGVVEDFIYVNCSLSPSIIEIWLRSTQRKVGRLSAGSKITSILTANDIVLCGTDT 903
+ + A+GVVEDFIY+NCS S S ++IWLR TQ+ VGR+SAGSKITS+LTAND VLCGT+
Sbjct: 1289 RYILALGVVEDFIYLNCSSSTSTLQIWLRGTQQNVGRISAGSKITSLLTANDTVLCGTEK 1348
Query: 904 GLIKGWIPL 930
GLIKGWIPL
Sbjct: 1349 GLIKGWIPL 1357
>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
Length = 1378
Score = 402 bits (1032), Expect = e-109
Identities = 197/305 (64%), Positives = 245/305 (80%)
Frame = +1
Query: 1 LKVSEYFLPAQSRISCVHTQVLEAGYNCGVAASALIYYKGQLHSGHFDGSIKVWDIREQT 180
LK+++YFLP +S ISCVHTQ+LE G C A +ALIYY+GQL SG+ DGSIKVWDI+ Q+
Sbjct: 1031 LKIADYFLPYKSXISCVHTQILEMGRKCSGAVTALIYYRGQLCSGYSDGSIKVWDIKGQS 1090
Query: 181 ATLVWEVREHKKAVTCFTLSEPGDSLLSGSADRTIRVWQMVQRRLACVEVIETKEPIHKI 360
ATLV +++EH+KAVTCF+ EPGDSLLSGSAD+TIRVWQMV+R++ C EVI TKEP+ +
Sbjct: 1091 ATLVLDIKEHRKAVTCFSHFEPGDSLLSGSADKTIRVWQMVKRKMECTEVISTKEPVQNL 1150
Query: 361 ESYKESIFVLTQRRGVKVFDASRTVKRIYKSKHVKCMAVVQRKLYLGCKDSSIQEVDITN 540
+++ + IF +T GVKVFDASR VK I KSKHVKC+ VVQ +LY+GC DSSIQEV IT
Sbjct: 1151 DTHGQLIFTVTHGHGVKVFDASRKVKDICKSKHVKCVRVVQGRLYIGCMDSSIQEVVITR 1210
Query: 541 ERVKEIKAPNKRWWAKNKPINDILVYRDWLYSARGVLVEGLVLKERRKERNPQMSIPMEK 720
R +EI+AP K W +N+PIN I+VY+DWLYSA + VEG KE ++ PQMS+ +K
Sbjct: 1211 AREQEIRAPAKSWRMQNRPINSIVVYKDWLYSASDI-VEGSNFKEWKRHSKPQMSMVPDK 1269
Query: 721 GKRVQAMGVVEDFIYVNCSLSPSIIEIWLRSTQRKVGRLSAGSKITSILTANDIVLCGTD 900
G V AMG+VEDFIY+NCS S SI++IWLR TQ+K GRLSAGS+ITS+LTANDIVLCGT+
Sbjct: 1270 GASVLAMGIVEDFIYLNCSSSTSILQIWLRGTQQKAGRLSAGSRITSLLTANDIVLCGTE 1329
Query: 901 TGLIK 915
GLIK
Sbjct: 1330 MGLIK 1334
>ref|XP_002328632.1| predicted protein [Populus trichocarpa] gi|222838614|gb|EEE76979.1|
predicted protein [Populus trichocarpa]
Length = 1305
Score = 397 bits (1021), Expect = e-108
Identities = 193/309 (62%), Positives = 247/309 (79%)
Frame = +1
Query: 4 KVSEYFLPAQSRISCVHTQVLEAGYNCGVAASALIYYKGQLHSGHFDGSIKVWDIREQTA 183
+V++Y+LP QSRISCVHTQ+LEA + A ++LIYYKG L+SGH DGSIKVWDI++Q+A
Sbjct: 998 RVADYYLPNQSRISCVHTQILEASDSSSGAITSLIYYKGLLYSGHSDGSIKVWDIKQQSA 1057
Query: 184 TLVWEVREHKKAVTCFTLSEPGDSLLSGSADRTIRVWQMVQRRLACVEVIETKEPIHKIE 363
T++W+++EHKKAVTCF+L E G+SLLSGS+D+TIRVW+MVQR+ C EVI +EPI ++E
Sbjct: 1058 TIIWDLKEHKKAVTCFSLFEAGESLLSGSSDKTIRVWKMVQRKPECTEVIAMEEPIRQLE 1117
Query: 364 SYKESIFVLTQRRGVKVFDASRTVKRIYKSKHVKCMAVVQRKLYLGCKDSSIQEVDITNE 543
Y + IFV+TQ +KV+D+SRT + I K+K VK M VVQ K+Y+GCKDSSIQE+ I +
Sbjct: 1118 KYDQMIFVITQGHRMKVYDSSRTARDICKAKKVKSMRVVQGKIYIGCKDSSIQELTIATK 1177
Query: 544 RVKEIKAPNKRWWAKNKPINDILVYRDWLYSARGVLVEGLVLKERRKERNPQMSIPMEKG 723
R +EIKAP K W + KPIN I+VYRDWLYSA V +EG +KE R P++SI +KG
Sbjct: 1178 REQEIKAPTKSWIMQKKPINAIVVYRDWLYSASSV-IEGSKVKEWRTHHKPRISIAADKG 1236
Query: 724 KRVQAMGVVEDFIYVNCSLSPSIIEIWLRSTQRKVGRLSAGSKITSILTANDIVLCGTDT 903
+ V MGVVEDFIY+N S S S ++IWLR Q+KVGR+SAGSKITS+LTAND+VLCGT+
Sbjct: 1237 RNVLLMGVVEDFIYLNSSSSTSTLQIWLRGMQQKVGRISAGSKITSLLTANDMVLCGTEK 1296
Query: 904 GLIKGWIPL 930
GLIKGWIPL
Sbjct: 1297 GLIKGWIPL 1305