BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031387
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   146   2e-33
emb|CBI31329.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]   145   4e-33
ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32

>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  146 bits (369), Expect = 2e-33
 Identities = 67/114 (58%), Positives = 90/114 (78%)
 Frame = -3

Query: 344 HMRYHGVNLDSVTIVIGLGACSETGFITMGRELHGYAVHRCFDGFDIVKNALITMYSRCN 165
           HMR +G+++DSV  +IGLGACS  G I +GRE+HG A+   +DG D VKNALITMYSRC 
Sbjct: 320 HMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCK 379

Query: 164 DLRLAYLLFRSSENKSLVTWNSIIAGCIYLDLYDEASFVFREMLFTGIKPNYVT 3
            LR AY LF+S+  K+++TWNS+++G  ++D  +EASF+FREML +GI+PNYVT
Sbjct: 380 YLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVT 433



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/113 (30%), Positives = 57/113 (50%)
 Frame = -3

Query: 341 MRYHGVNLDSVTIVIGLGACSETGFITMGRELHGYAVHRCFDGFDIVKNALITMYSRCND 162
           M + G+  D  T    L AC E   I  G++LH      C      V N+L++MY++  +
Sbjct: 185 MTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGE 244

Query: 161 LRLAYLLFRSSENKSLVTWNSIIAGCIYLDLYDEASFVFREMLFTGIKPNYVT 3
           L  A  LF +   +  V+WN++I+G     ++ EA  +F +M   GI+ N +T
Sbjct: 245 LSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIIT 297


>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/113 (61%), Positives = 86/113 (76%)
 Frame = -3

Query: 341 MRYHGVNLDSVTIVIGLGACSETGFITMGRELHGYAVHRCFDGFDIVKNALITMYSRCND 162
           MR  G +LDSV ++IGLGACS  G   +G+E+H +A+  CF   D VKNALITMYSRC D
Sbjct: 283 MRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKD 342

Query: 161 LRLAYLLFRSSENKSLVTWNSIIAGCIYLDLYDEASFVFREMLFTGIKPNYVT 3
           L+ AYLLF+  E KSL+TWNSII+GC ++D  +EASF+ REML  GI+PNYVT
Sbjct: 343 LKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVT 395


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/113 (61%), Positives = 86/113 (76%)
 Frame = -3

Query: 341 MRYHGVNLDSVTIVIGLGACSETGFITMGRELHGYAVHRCFDGFDIVKNALITMYSRCND 162
           MR  G +LDSV ++IGLGACS  G   +G+E+H +A+  CF   D VKNALITMYSRC D
Sbjct: 328 MRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKD 387

Query: 161 LRLAYLLFRSSENKSLVTWNSIIAGCIYLDLYDEASFVFREMLFTGIKPNYVT 3
           L+ AYLLF+  E KSL+TWNSII+GC ++D  +EASF+ REML  GI+PNYVT
Sbjct: 388 LKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVT 440


>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/113 (59%), Positives = 87/113 (76%)
 Frame = -3

Query: 341 MRYHGVNLDSVTIVIGLGACSETGFITMGRELHGYAVHRCFDGFDIVKNALITMYSRCND 162
           MR  G +LDSV ++IGLGACS  G   +G+E+H +A+  CF   D VKN+LITMYSRC D
Sbjct: 402 MRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKD 461

Query: 161 LRLAYLLFRSSENKSLVTWNSIIAGCIYLDLYDEASFVFREMLFTGIKPNYVT 3
           L+ AYLLF+  E KSL++WNSII+GC ++D  +EASF+ REML +GI+PNYVT
Sbjct: 462 LKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVT 514


>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/113 (59%), Positives = 87/113 (76%)
 Frame = -3

Query: 341 MRYHGVNLDSVTIVIGLGACSETGFITMGRELHGYAVHRCFDGFDIVKNALITMYSRCND 162
           MR   ++LD V ++IGLGACS  G I +G  +H  A+  CFDGFD V+NALITMYSRC D
Sbjct: 270 MRRCDIDLDPVAMIIGLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKD 329

Query: 161 LRLAYLLFRSSENKSLVTWNSIIAGCIYLDLYDEASFVFREMLFTGIKPNYVT 3
           LR A +LF+S + KSL TWNS+++G  ++D  +EASF+FREMLF+GI+PNYVT
Sbjct: 330 LRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVT 382



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
 Frame = -3

Query: 341 MRYHGVNLDSVTIVIGLGACSETGFITMGRELHGYAVHRCFDGFDI-VKNALITMYSRCN 165
           M + GV  D+ T    L AC E   +  GRE+H          +++ V N+L++MY +  
Sbjct: 133 MVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFG 192

Query: 164 DLRLAYLLFRSSENKSLVTWNSIIAGCIYLDLYDEASFVFREMLFTGIKPNYVT 3
           +L  A  LF     +  V+WN II+      L+ EA  +F EM   G + N +T
Sbjct: 193 ELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNIIT 246