BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031328
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC17072.1| Similar to hypothetical protein gb|Z97336 from A....   138   5e-31
ref|NP_178014.2| Mitochondrial transcription termination factor ...   138   5e-31
gb|AAQ22615.1| At1g78930 [Arabidopsis thaliana]                       138   5e-31
ref|XP_004145310.1| PREDICTED: uncharacterized protein LOC101222...   137   7e-31
emb|CBI18428.3| unnamed protein product [Vitis vinifera]              136   2e-30

>gb|AAC17072.1| Similar to hypothetical protein gb|Z97336 from A. thaliana. This
           gene is probably cut off [Arabidopsis thaliana]
          Length = 600

 Score =  138 bits (347), Expect = 5e-31
 Identities = 72/114 (63%), Positives = 91/114 (79%)
 Frame = +2

Query: 2   LNPSSSTNIARYLVSESVPQLIQKVKYIKEMLYPGSDNCEYVGKNARRMMTQLSIFVDED 181
           L+ SS+  +A Y+ SES+P L+ KVKY+KE+ + GSD    VGK ARRMM  LSI +DED
Sbjct: 158 LSLSSAMYLAHYVSSESLPILLDKVKYLKEIFFSGSDEKGLVGKYARRMMLYLSIPIDED 217

Query: 182 VQQTLSFFEKMEAKRGGLNMLGFEDASFQNLIESFPRLLSLSVKNHLEPLVEFL 343
           VQQTLSFFEK+EA+RGGL+MLG  DASF+ L+ESFPRLL LS +N ++P+VEFL
Sbjct: 218 VQQTLSFFEKIEARRGGLDMLGSVDASFRFLLESFPRLLLLSEENDMKPMVEFL 271


>ref|NP_178014.2| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|110736356|dbj|BAF00147.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332198059|gb|AEE36180.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 591

 Score =  138 bits (347), Expect = 5e-31
 Identities = 72/114 (63%), Positives = 91/114 (79%)
 Frame = +2

Query: 2   LNPSSSTNIARYLVSESVPQLIQKVKYIKEMLYPGSDNCEYVGKNARRMMTQLSIFVDED 181
           L+ SS+  +A Y+ SES+P L+ KVKY+KE+ + GSD    VGK ARRMM  LSI +DED
Sbjct: 158 LSLSSAMYLAHYVSSESLPILLDKVKYLKEIFFSGSDEKGLVGKYARRMMLYLSIPIDED 217

Query: 182 VQQTLSFFEKMEAKRGGLNMLGFEDASFQNLIESFPRLLSLSVKNHLEPLVEFL 343
           VQQTLSFFEK+EA+RGGL+MLG  DASF+ L+ESFPRLL LS +N ++P+VEFL
Sbjct: 218 VQQTLSFFEKIEARRGGLDMLGSVDASFRFLLESFPRLLLLSEENDMKPMVEFL 271


>gb|AAQ22615.1| At1g78930 [Arabidopsis thaliana]
          Length = 525

 Score =  138 bits (347), Expect = 5e-31
 Identities = 72/114 (63%), Positives = 91/114 (79%)
 Frame = +2

Query: 2   LNPSSSTNIARYLVSESVPQLIQKVKYIKEMLYPGSDNCEYVGKNARRMMTQLSIFVDED 181
           L+ SS+  +A Y+ SES+P L+ KVKY+KE+ + GSD    VGK ARRMM  LSI +DED
Sbjct: 92  LSLSSAMYLAHYVSSESLPILLDKVKYLKEIFFSGSDEKGLVGKYARRMMLYLSIPIDED 151

Query: 182 VQQTLSFFEKMEAKRGGLNMLGFEDASFQNLIESFPRLLSLSVKNHLEPLVEFL 343
           VQQTLSFFEK+EA+RGGL+MLG  DASF+ L+ESFPRLL LS +N ++P+VEFL
Sbjct: 152 VQQTLSFFEKIEARRGGLDMLGSVDASFRFLLESFPRLLLLSEENDMKPMVEFL 205


>ref|XP_004145310.1| PREDICTED: uncharacterized protein LOC101222814 [Cucumis sativus]
           gi|449472883|ref|XP_004153723.1| PREDICTED:
           uncharacterized protein LOC101222366 [Cucumis sativus]
           gi|449514567|ref|XP_004164414.1| PREDICTED:
           uncharacterized LOC101222366 [Cucumis sativus]
          Length = 594

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/114 (60%), Positives = 90/114 (78%)
 Frame = +2

Query: 2   LNPSSSTNIARYLVSESVPQLIQKVKYIKEMLYPGSDNCEYVGKNARRMMTQLSIFVDED 181
           +N SS+ N+ARYL  E +P LI KVKY+K + + GS +   +GKNARRMMT LSI  D+D
Sbjct: 166 MNLSSAMNVARYLSGEMLPSLIYKVKYMKALFFSGSGDGILIGKNARRMMTNLSIPPDDD 225

Query: 182 VQQTLSFFEKMEAKRGGLNMLGFEDASFQNLIESFPRLLSLSVKNHLEPLVEFL 343
           VQQTLSFFEK+EA+RGGL+ML   + SF  L+ESFPR+L LSV++H++P+VEFL
Sbjct: 226 VQQTLSFFEKIEARRGGLDMLSSNEESFGLLLESFPRMLLLSVESHVKPMVEFL 279


>emb|CBI18428.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/114 (58%), Positives = 96/114 (84%)
 Frame = +2

Query: 2   LNPSSSTNIARYLVSESVPQLIQKVKYIKEMLYPGSDNCEYVGKNARRMMTQLSIFVDED 181
           L+ SS+ ++ARYL SES+P LI+KV+++K+M +   ++  ++GKNARRMM  LSI +DED
Sbjct: 157 LSLSSALSVARYLSSESLPGLIEKVRFVKQMFFSEGNDEGFLGKNARRMMMYLSIPIDED 216

Query: 182 VQQTLSFFEKMEAKRGGLNMLGFEDASFQNLIESFPRLLSLSVKNHLEPLVEFL 343
           +QQTLSFFEK+EA+RGGL++L  +DASF  L+ESFPRLL LSV++HL+P+++FL
Sbjct: 217 LQQTLSFFEKIEARRGGLDILCSKDASFGYLVESFPRLLLLSVESHLKPMMKFL 270