BLASTX nr result

ID: Coptis21_contig00031325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031325
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277898.1| PREDICTED: uncharacterized protein LOC100254...   147   9e-34
emb|CAN75979.1| hypothetical protein VITISV_012183 [Vitis vinifera]   147   9e-34
ref|XP_002312520.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
ref|XP_002517209.1| conserved hypothetical protein [Ricinus comm...   137   1e-30
ref|XP_002314712.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28

>ref|XP_002277898.1| PREDICTED: uncharacterized protein LOC100254485 [Vitis vinifera]
          Length = 235

 Score =  147 bits (371), Expect = 9e-34
 Identities = 81/135 (60%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
 Frame = -3

Query: 393 MVSLESIQATSRSIDTTCSPRISFSVDFLDDKSFLSLSPNSE-TXXXXXXXXXARNMDFE 217
           MVSLE++QA+SRSI+ T SPRISFS DFLD+K+F+S+SPNSE           ARN DFE
Sbjct: 1   MVSLEAVQASSRSIEPTVSPRISFSSDFLDEKNFISISPNSEKEKQHEMDQEKARNTDFE 60

Query: 216 FRSGNSATTNTMITADELFFEGRLLPFWQMQQSNKLNKITL---XXXXXXXXXXXXXENR 46
           F S NS T++TM+TADELFFEG+LLPFWQ Q S KLNK++L                E+R
Sbjct: 61  FLSSNS-TSHTMLTADELFFEGKLLPFWQRQHSEKLNKMSLKTKNDEEQEEEEANKEESR 119

Query: 45  VSWFIDEDPSPRPPK 1
           VSWF+D+DPSPRPPK
Sbjct: 120 VSWFVDDDPSPRPPK 134


>emb|CAN75979.1| hypothetical protein VITISV_012183 [Vitis vinifera]
          Length = 301

 Score =  147 bits (371), Expect = 9e-34
 Identities = 81/135 (60%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
 Frame = -3

Query: 393 MVSLESIQATSRSIDTTCSPRISFSVDFLDDKSFLSLSPNSE-TXXXXXXXXXARNMDFE 217
           MVSLE++QA+SRSI+ T SPRISFS DFLD+K+F+S+SPNSE           ARN DFE
Sbjct: 1   MVSLEAVQASSRSIEPTVSPRISFSSDFLDEKNFISISPNSEKEKQHEMDQEKARNTDFE 60

Query: 216 FRSGNSATTNTMITADELFFEGRLLPFWQMQQSNKLNKITL---XXXXXXXXXXXXXENR 46
           F S NS T++TM+TADELFFEG+LLPFWQ Q S KLNK++L                E+R
Sbjct: 61  FLSSNS-TSHTMLTADELFFEGKLLPFWQRQHSEKLNKMSLKTKNDEEQEEEGANKEESR 119

Query: 45  VSWFIDEDPSPRPPK 1
           VSWF+D+DPSPRPPK
Sbjct: 120 VSWFVDDDPSPRPPK 134


>ref|XP_002312520.1| predicted protein [Populus trichocarpa] gi|222852340|gb|EEE89887.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  137 bits (346), Expect = 7e-31
 Identities = 73/132 (55%), Positives = 91/132 (68%), Gaps = 1/132 (0%)
 Frame = -3

Query: 393 MVSLESIQATSRSIDTTCSPRISFSVDFLDDKSFLSLSPNSET-XXXXXXXXXARNMDFE 217
           MVSLE++QATSRSID   SPRISFS +FLDDK+F+S+SP+ +           ARN +FE
Sbjct: 1   MVSLETVQATSRSIDQASSPRISFSAEFLDDKNFISISPSPQAEKDKETERERARNAEFE 60

Query: 216 FRSGNSATTNTMITADELFFEGRLLPFWQMQQSNKLNKITLXXXXXXXXXXXXXENRVSW 37
           F S +  ++ TM+TADELF+EGRLLPFWQMQ S KLNK++L             E    W
Sbjct: 61  FLS-SKMSSQTMLTADELFYEGRLLPFWQMQHSEKLNKVSLKTKNAEEEEEVSKEEPRVW 119

Query: 36  FIDEDPSPRPPK 1
           F+D+DPSPRPPK
Sbjct: 120 FVDDDPSPRPPK 131


>ref|XP_002517209.1| conserved hypothetical protein [Ricinus communis]
           gi|223543844|gb|EEF45372.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 245

 Score =  137 bits (344), Expect = 1e-30
 Identities = 79/142 (55%), Positives = 95/142 (66%), Gaps = 11/142 (7%)
 Frame = -3

Query: 393 MVSLESIQATSRSIDTTCSPRISFSVDFLDDKSFLSLSPNSET-XXXXXXXXXARN--MD 223
           MVSLE++QATSRSID   SPRISFS +FLD+ +F+S++PN+            ARN   D
Sbjct: 1   MVSLEAVQATSRSIDQPSSPRISFSAEFLDENNFISINPNARAERDQEMEREKARNYAAD 60

Query: 222 FEFRSGNSATTN--TMITADELFFEGRLLPFWQMQQSNKLNKITL------XXXXXXXXX 67
           FEF SGNS  ++  TM+TADELFFEG+LLPFWQMQQS KL+KI L               
Sbjct: 61  FEFLSGNSTMSSHATMLTADELFFEGKLLPFWQMQQSEKLHKINLKCKETEEGEEEEVEV 120

Query: 66  XXXXENRVSWFIDEDPSPRPPK 1
               E RVSWF+D+DPSPRPPK
Sbjct: 121 NNKEEPRVSWFVDDDPSPRPPK 142


>ref|XP_002314712.1| predicted protein [Populus trichocarpa] gi|222863752|gb|EEF00883.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  130 bits (327), Expect = 1e-28
 Identities = 72/134 (53%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
 Frame = -3

Query: 393 MVSLESIQATSRSIDTTCSPRISFSVDFLDDKSFLSLSPNSETXXXXXXXXXA-RNMDFE 217
           M+SLE++QATSRSI+ + SPRISFS DFL DK+F+ +SPN +            RN +FE
Sbjct: 1   MISLETVQATSRSIEPS-SPRISFSADFLHDKNFIPISPNQQAEKDGEAEREKARNAEFE 59

Query: 216 FRSGNSATTNTMITADELFFEGRLLPFWQMQQSNKLNKITLXXXXXXXXXXXXXENRVS- 40
           F S +  ++ TM+TADELFFEGRLLPFWQMQ S KLNKI+L                   
Sbjct: 60  FLS-SKMSSQTMLTADELFFEGRLLPFWQMQHSEKLNKISLKTKEAEEGEGEEMSKEEPR 118

Query: 39  -WFIDEDPSPRPPK 1
            WF+DEDPSPRPPK
Sbjct: 119 VWFVDEDPSPRPPK 132


Top