BLASTX nr result

ID: Coptis21_contig00031320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031320
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272628.1| PREDICTED: FKBP-type peptidyl-prolyl cis-tra...   116   2e-24
gb|ACN40593.1| unknown [Picea sitchensis]                             116   2e-24
ref|XP_002297914.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
gb|AFK40756.1| unknown [Medicago truncatula]                          112   3e-23
ref|NP_001241045.1| uncharacterized protein LOC100778390 [Glycin...   112   4e-23

>ref|XP_002272628.1| PREDICTED: FKBP-type peptidyl-prolyl cis-trans isomerase 3,
           chloroplastic [Vitis vinifera]
           gi|297738045|emb|CBI27246.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/75 (74%), Positives = 60/75 (80%)
 Frame = -1

Query: 234 KPLTFRIGVGEVXXXXXXXXXXXXXIPPMLAGGKRTLKLPPELGYGVRGAGCKAGSCVIP 55
           KPLTFRIGVGEV             +PPMLAGGKRTLKLPPELGYG RGAGC+ GSC+IP
Sbjct: 142 KPLTFRIGVGEVIRGWDQGILGGDGVPPMLAGGKRTLKLPPELGYGTRGAGCRGGSCIIP 201

Query: 54  PNSVLLFDVEFIGKA 10
           P+SVLLFDVEFIGKA
Sbjct: 202 PDSVLLFDVEFIGKA 216


>gb|ACN40593.1| unknown [Picea sitchensis]
          Length = 221

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/75 (73%), Positives = 61/75 (81%)
 Frame = -1

Query: 234 KPLTFRIGVGEVXXXXXXXXXXXXXIPPMLAGGKRTLKLPPELGYGVRGAGCKAGSCVIP 55
           KPL+FR+GVGEV             IPPML+GGKRTLK+PPELGYGVRGAGC+ GSCVIP
Sbjct: 147 KPLSFRVGVGEVIKGWDRGILGGDGIPPMLSGGKRTLKIPPELGYGVRGAGCRGGSCVIP 206

Query: 54  PNSVLLFDVEFIGKA 10
           PNSVLLFDVEF+GKA
Sbjct: 207 PNSVLLFDVEFVGKA 221


>ref|XP_002297914.1| predicted protein [Populus trichocarpa] gi|222845172|gb|EEE82719.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/75 (73%), Positives = 59/75 (78%)
 Frame = -1

Query: 234 KPLTFRIGVGEVXXXXXXXXXXXXXIPPMLAGGKRTLKLPPELGYGVRGAGCKAGSCVIP 55
           KPLTFR+GVGEV             IPPMLAGGKR LKLPPEL YG+RGAGCK GSC+IP
Sbjct: 135 KPLTFRVGVGEVIKGWDQGILGGDGIPPMLAGGKRKLKLPPELAYGMRGAGCKGGSCIIP 194

Query: 54  PNSVLLFDVEFIGKA 10
           P+SVLLFDVEFIGKA
Sbjct: 195 PDSVLLFDVEFIGKA 209


>gb|AFK40756.1| unknown [Medicago truncatula]
          Length = 207

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/75 (72%), Positives = 58/75 (77%)
 Frame = -1

Query: 234 KPLTFRIGVGEVXXXXXXXXXXXXXIPPMLAGGKRTLKLPPELGYGVRGAGCKAGSCVIP 55
           KPLTFR+GVGEV             IPPML GGKRTLKLPPE GYG RGAGCK GSCVIP
Sbjct: 133 KPLTFRVGVGEVIKGWDVGILGDDGIPPMLTGGKRTLKLPPEFGYGSRGAGCKGGSCVIP 192

Query: 54  PNSVLLFDVEFIGKA 10
           P++VLLFDVEF+GKA
Sbjct: 193 PDAVLLFDVEFVGKA 207


>ref|NP_001241045.1| uncharacterized protein LOC100778390 [Glycine max]
           gi|255640736|gb|ACU20652.1| unknown [Glycine max]
          Length = 216

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/75 (69%), Positives = 59/75 (78%)
 Frame = -1

Query: 234 KPLTFRIGVGEVXXXXXXXXXXXXXIPPMLAGGKRTLKLPPELGYGVRGAGCKAGSCVIP 55
           KPLTFR+GVGEV             +PPMLAGGKRTLK+PPELGYG RGAGC+ GSC+IP
Sbjct: 142 KPLTFRVGVGEVIKGWDEGIIGGDGVPPMLAGGKRTLKIPPELGYGSRGAGCRGGSCIIP 201

Query: 54  PNSVLLFDVEFIGKA 10
           P+SVLLFDVEF+ KA
Sbjct: 202 PDSVLLFDVEFVSKA 216


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