BLASTX nr result

ID: Coptis21_contig00031307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031307
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26414.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricin...   129   2e-28
ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Viti...   129   2e-28
emb|CAN81193.1| hypothetical protein VITISV_022848 [Vitis vinifera]   128   6e-28
ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like ...   127   7e-28

>emb|CBI26414.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/97 (70%), Positives = 78/97 (80%)
 Frame = -1

Query: 296 LGMELEKAKAIQSRIDDFVKHMSDGLKRSYW*E*KAKAIQSRIERDAELEFTQEELNAVP 117
           LGMEL+KAKAIQSRID+F K MS+ L+               IERD+ELEFTQEELNAVP
Sbjct: 78  LGMELDKAKAIQSRIDEFTKRMSELLQ---------------IERDSELEFTQEELNAVP 122

Query: 116 MPDENSDTSKPIEYLVSHGQAQQELCDTICNLSAVSS 6
            PDE+SD+SKPIE+LVSHGQAQQELCDTICNL+AVS+
Sbjct: 123 TPDESSDSSKPIEFLVSHGQAQQELCDTICNLNAVST 159


>ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricinus communis]
           gi|223536739|gb|EEF38380.1| DNA-binding protein smubp-2,
           putative [Ricinus communis]
          Length = 989

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/98 (70%), Positives = 77/98 (78%)
 Frame = -1

Query: 296 LGMELEKAKAIQSRIDDFVKHMSDGLKRSYW*E*KAKAIQSRIERDAELEFTQEELNAVP 117
           LGM L+KAKAIQSRID+F K MS+ L+               IERD+ELEFTQEELNAVP
Sbjct: 278 LGMNLDKAKAIQSRIDEFTKTMSELLQ---------------IERDSELEFTQEELNAVP 322

Query: 116 MPDENSDTSKPIEYLVSHGQAQQELCDTICNLSAVSSS 3
            PDENSD SKPIE+LVSHGQAQQELCDTICNL+AVS+S
Sbjct: 323 TPDENSDPSKPIEFLVSHGQAQQELCDTICNLNAVSTS 360


>ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Vitis vinifera]
          Length = 953

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/97 (70%), Positives = 78/97 (80%)
 Frame = -1

Query: 296 LGMELEKAKAIQSRIDDFVKHMSDGLKRSYW*E*KAKAIQSRIERDAELEFTQEELNAVP 117
           LGMEL+KAKAIQSRID+F K MS+ L+               IERD+ELEFTQEELNAVP
Sbjct: 242 LGMELDKAKAIQSRIDEFTKRMSELLQ---------------IERDSELEFTQEELNAVP 286

Query: 116 MPDENSDTSKPIEYLVSHGQAQQELCDTICNLSAVSS 6
            PDE+SD+SKPIE+LVSHGQAQQELCDTICNL+AVS+
Sbjct: 287 TPDESSDSSKPIEFLVSHGQAQQELCDTICNLNAVST 323


>emb|CAN81193.1| hypothetical protein VITISV_022848 [Vitis vinifera]
          Length = 806

 Score =  128 bits (321), Expect = 6e-28
 Identities = 67/96 (69%), Positives = 77/96 (80%)
 Frame = -1

Query: 293 GMELEKAKAIQSRIDDFVKHMSDGLKRSYW*E*KAKAIQSRIERDAELEFTQEELNAVPM 114
           GMEL+KAKAIQSRID+F K MS+ L+               IERD+ELEFTQEELNAVP 
Sbjct: 223 GMELDKAKAIQSRIDEFTKRMSELLQ---------------IERDSELEFTQEELNAVPT 267

Query: 113 PDENSDTSKPIEYLVSHGQAQQELCDTICNLSAVSS 6
           PDE+SD+SKPIE+LVSHGQAQQELCDTICNL+AVS+
Sbjct: 268 PDESSDSSKPIEFLVSHGQAQQELCDTICNLNAVST 303


>ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
           gi|449527761|ref|XP_004170878.1| PREDICTED: DNA-binding
           protein SMUBP-2-like [Cucumis sativus]
          Length = 957

 Score =  127 bits (320), Expect = 7e-28
 Identities = 67/98 (68%), Positives = 77/98 (78%)
 Frame = -1

Query: 296 LGMELEKAKAIQSRIDDFVKHMSDGLKRSYW*E*KAKAIQSRIERDAELEFTQEELNAVP 117
           LGM+L+KAKAIQ+RID+F   MS+ L               RIERD+ELEFTQEELNAVP
Sbjct: 246 LGMDLKKAKAIQNRIDEFANRMSELL---------------RIERDSELEFTQEELNAVP 290

Query: 116 MPDENSDTSKPIEYLVSHGQAQQELCDTICNLSAVSSS 3
            PDE+SD SKPIE+LVSHGQAQQELCDTICNL+AVS+S
Sbjct: 291 TPDESSDNSKPIEFLVSHGQAQQELCDTICNLNAVSTS 328


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