BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031303
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    45   7e-10
ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2...    47   9e-10
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    46   1e-09
ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    44   4e-09
ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LR...    43   5e-09

>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 45.1 bits (105), Expect(2) = 7e-10
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = -2

Query: 216 DVDKWMLLLARKLASELILEFHHGPRYKVASSFFSCQRFNNTKI 85
           D+D+W L L RK   E +LE   G RYK+ S  FSCQ   + ++
Sbjct: 110 DIDRWTLHLCRKSIKEFVLEIWKGQRYKIHSCLFSCQSLTHLEL 153



 Score = 43.1 bits (100), Expect(2) = 7e-10
 Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
 Frame = -3

Query: 392 WRFRWMSISELVFDAHSVPPSVEGQR--NRKCVDFINHVRLLHNGTISRFEI 243
           WR++W ++  LVFD H V  + +       K +  I+HV LLH+G I++F++
Sbjct: 49  WRYKWATLPILVFDTHCVSVASQDHMIIKNKLLRIIDHVLLLHSGPINKFKL 100


>ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 47.4 bits (111), Expect(2) = 9e-10
 Identities = 20/46 (43%), Positives = 31/46 (67%)
 Frame = -2

Query: 240 NYLVCCRPDVDKWMLLLARKLASELILEFHHGPRYKVASSFFSCQR 103
           +YL CC PD+D+W+L L+R    EL+LE   G  ++V S  F+C++
Sbjct: 93  SYLQCC-PDIDQWILFLSRSDIKELVLELGEGEWFRVPSCLFNCKK 137



 Score = 40.4 bits (93), Expect(2) = 9e-10
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -3

Query: 392 WRFRWMSISELVFDAHSVPPSVEGQRNRKC-VDFINHVRLLHNGTISRFEIKTTW 231
           WR+RW +++ LVFD   +    +      C V+FI     LH G I +F++ T++
Sbjct: 40  WRYRWTTLTHLVFDDKCIRMCSDRPVVENCMVNFITRALFLHQGPIHKFQLSTSY 94


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 45.8 bits (107), Expect(2) = 1e-09
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
 Frame = -3

Query: 392 WRFRWMSISELVFDAH--SVPPSVEGQRNRKCVDFINHVRLLHNGTISRFEI 243
           WR++W  I  LVFD    S+P   +     K V+ I+HV LLHNG I +F++
Sbjct: 48  WRYKWAKIPHLVFDNKCVSIPSQDQTLIKDKLVNIIDHVLLLHNGPIQKFKL 99



 Score = 41.2 bits (95), Expect(2) = 1e-09
 Identities = 19/35 (54%), Positives = 23/35 (65%)
 Frame = -2

Query: 216 DVDKWMLLLARKLASELILEFHHGPRYKVASSFFS 112
           D+D+W+L L+R    E ILE   G RYKV SS FS
Sbjct: 109 DIDRWILHLSRSSIKEFILEIWKGQRYKVPSSLFS 143


>ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Cucumis
           sativus]
          Length = 418

 Score = 43.5 bits (101), Expect(2) = 4e-09
 Identities = 20/54 (37%), Positives = 31/54 (57%)
 Frame = -3

Query: 392 WRFRWMSISELVFDAHSVPPSVEGQRNRKCVDFINHVRLLHNGTISRFEIKTTW 231
           WR++W ++++LVFD   V  S +G      + FI HV  LH G I +F +  T+
Sbjct: 40  WRYKWTTLTQLVFDDDCVAMSNDG-IYEDLIYFITHVLFLHEGPIHKFHLSATY 92



 Score = 42.0 bits (97), Expect(2) = 4e-09
 Identities = 21/53 (39%), Positives = 32/53 (60%)
 Frame = -2

Query: 219 PDVDKWMLLLARKLASELILEFHHGPRYKVASSFFSCQRFNNTKIASLQIELD 61
           PD+D+W+L L+RK   ELI+E   G  ++V S  F+C +   T +   + ELD
Sbjct: 97  PDLDQWLLFLSRKGIRELIIELGDGEWFRVHSCLFNCSKL--TLLELYRCELD 147


>ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein
           At1g13570-like [Cucumis sativus]
          Length = 418

 Score = 43.1 bits (100), Expect(2) = 5e-09
 Identities = 20/54 (37%), Positives = 31/54 (57%)
 Frame = -3

Query: 392 WRFRWMSISELVFDAHSVPPSVEGQRNRKCVDFINHVRLLHNGTISRFEIKTTW 231
           WR++W ++++LVFD   V  S +G      + FI HV  LH G I +F +  T+
Sbjct: 40  WRYKWTTLTQLVFDDDCVAMSNDG-IYEDLIYFITHVLXLHEGPIHKFHLSATY 92



 Score = 42.0 bits (97), Expect(2) = 5e-09
 Identities = 21/53 (39%), Positives = 32/53 (60%)
 Frame = -2

Query: 219 PDVDKWMLLLARKLASELILEFHHGPRYKVASSFFSCQRFNNTKIASLQIELD 61
           PD+D+W+L L+RK   ELI+E   G  ++V S  F+C +   T +   + ELD
Sbjct: 97  PDLDQWLLFLSRKGIRELIIELGDGEWFRVHSCLFNCSKL--TLLELYRCELD 147