BLASTX nr result

ID: Coptis21_contig00031302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031302
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259...   163   1e-38
emb|CBI26466.3| unnamed protein product [Vitis vinifera]              163   1e-38
gb|AAP45157.2| hypothetical protein SBB1_21t00001 [Solanum bulbo...   161   4e-38
gb|AAP45172.2| hypothetical protein SBB1_14t00021 [Solanum bulbo...   161   4e-38
ref|XP_003540042.1| PREDICTED: uncharacterized protein LOC100787...   145   3e-33

>ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259737 [Vitis vinifera]
          Length = 330

 Score =  163 bits (413), Expect = 1e-38
 Identities = 75/93 (80%), Positives = 81/93 (87%)
 Frame = -1

Query: 281 MNSTSAATGMAMTGYRPPFTASQWQELEHQALIFKYLMAGLPVPPDLVIPIKKSFESMSA 102
           +   S ATGM +     PFT SQWQELEHQALIFKYLMAGLPVPPDLV+PI+KSFESMS+
Sbjct: 8   VGGASMATGMMVRS--SPFTVSQWQELEHQALIFKYLMAGLPVPPDLVLPIQKSFESMSS 65

Query: 101 RFFHHPSMGYCSFYGKKADPEPGRCRRTDGKKW 3
           RFFHHP+MGYCSFYGKK DPEPGRCRRTDGKKW
Sbjct: 66  RFFHHPTMGYCSFYGKKVDPEPGRCRRTDGKKW 98


>emb|CBI26466.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  163 bits (413), Expect = 1e-38
 Identities = 75/93 (80%), Positives = 81/93 (87%)
 Frame = -1

Query: 281 MNSTSAATGMAMTGYRPPFTASQWQELEHQALIFKYLMAGLPVPPDLVIPIKKSFESMSA 102
           +   S ATGM +     PFT SQWQELEHQALIFKYLMAGLPVPPDLV+PI+KSFESMS+
Sbjct: 51  VGGASMATGMMVRS--SPFTVSQWQELEHQALIFKYLMAGLPVPPDLVLPIQKSFESMSS 108

Query: 101 RFFHHPSMGYCSFYGKKADPEPGRCRRTDGKKW 3
           RFFHHP+MGYCSFYGKK DPEPGRCRRTDGKKW
Sbjct: 109 RFFHHPTMGYCSFYGKKVDPEPGRCRRTDGKKW 141


>gb|AAP45157.2| hypothetical protein SBB1_21t00001 [Solanum bulbocastanum]
          Length = 445

 Score =  161 bits (408), Expect = 4e-38
 Identities = 68/80 (85%), Positives = 78/80 (97%)
 Frame = -1

Query: 242 GYRPPFTASQWQELEHQALIFKYLMAGLPVPPDLVIPIKKSFESMSARFFHHPSMGYCSF 63
           GYRPPFTA QWQELEHQA+I+KYL+AGLPVPPDLV+PI++SFE++SARFFHHPS+GYCS+
Sbjct: 26  GYRPPFTAVQWQELEHQAMIYKYLVAGLPVPPDLVVPIRRSFEAISARFFHHPSLGYCSY 85

Query: 62  YGKKADPEPGRCRRTDGKKW 3
           YGKK DPEPGRCRRTDGKKW
Sbjct: 86  YGKKFDPEPGRCRRTDGKKW 105


>gb|AAP45172.2| hypothetical protein SBB1_14t00021 [Solanum bulbocastanum]
          Length = 552

 Score =  161 bits (408), Expect = 4e-38
 Identities = 68/80 (85%), Positives = 78/80 (97%)
 Frame = -1

Query: 242 GYRPPFTASQWQELEHQALIFKYLMAGLPVPPDLVIPIKKSFESMSARFFHHPSMGYCSF 63
           GYRPPFTA QWQELEHQA+I+KYL+AGLPVPPDLV+PI++SFE++SARFFHHPS+GYCS+
Sbjct: 26  GYRPPFTAVQWQELEHQAMIYKYLVAGLPVPPDLVVPIRRSFEAISARFFHHPSLGYCSY 85

Query: 62  YGKKADPEPGRCRRTDGKKW 3
           YGKK DPEPGRCRRTDGKKW
Sbjct: 86  YGKKFDPEPGRCRRTDGKKW 105


>ref|XP_003540042.1| PREDICTED: uncharacterized protein LOC100787226 [Glycine max]
          Length = 327

 Score =  145 bits (366), Expect = 3e-33
 Identities = 64/79 (81%), Positives = 72/79 (91%), Gaps = 1/79 (1%)
 Frame = -1

Query: 236 RPPFTASQWQELEHQALIFKYLMAGLPVPPDLVIPIKKSFES-MSARFFHHPSMGYCSFY 60
           R PFT SQWQELEHQALIFKY++AGLPVPPDLV+PI+KSF+S +S  FFHHP++ YCSFY
Sbjct: 18  RSPFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPIQKSFDSTLSHAFFHHPTLSYCSFY 77

Query: 59  GKKADPEPGRCRRTDGKKW 3
           GKK DPEPGRCRRTDGKKW
Sbjct: 78  GKKVDPEPGRCRRTDGKKW 96


Top