BLASTX nr result

ID: Coptis21_contig00031297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031297
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275196.1| PREDICTED: uncharacterized protein LOC100256...    82   6e-14
ref|XP_002520749.1| conserved hypothetical protein [Ricinus comm...    78   7e-13
ref|XP_004167583.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    78   9e-13
ref|XP_004140223.1| PREDICTED: uncharacterized protein LOC101213...    78   9e-13
ref|XP_002307580.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12

>ref|XP_002275196.1| PREDICTED: uncharacterized protein LOC100256371 [Vitis vinifera]
           gi|296086702|emb|CBI32337.3| unnamed protein product
           [Vitis vinifera]
          Length = 926

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
 Frame = +2

Query: 128 FQHHGRARTTRI----LNMQTQRRLGVVLNSLGVNSFESNEKQKQQPRTLFPGGFKRPEI 295
           + HH     T      L + ++RR  + + S+  NS     + KQ PRT++PGG+KRPEI
Sbjct: 23  YHHHSHRNHTHNHRYPLPLFSRRRSRLSIVSIANNSIPPTSQNKQ-PRTVYPGGYKRPEI 81

Query: 296 KVPGLILRLSTNDVLKNGKNVDVLDCVDVAVSKWVGIVLLDG 421
           +VP L+L+LS ++VL       VLD VD AVSKWVG+V+LDG
Sbjct: 82  RVPSLVLQLSVDEVL---DRAGVLDVVDEAVSKWVGVVVLDG 120


>ref|XP_002520749.1| conserved hypothetical protein [Ricinus communis]
           gi|223540134|gb|EEF41711.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 921

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/69 (53%), Positives = 52/69 (75%)
 Frame = +2

Query: 215 VNSFESNEKQKQQPRTLFPGGFKRPEIKVPGLILRLSTNDVLKNGKNVDVLDCVDVAVSK 394
           +N     ++ +Q PRTLFPGG+KRPEIKVP ++L+L  +DVL++G     LD +D A+SK
Sbjct: 50  INQSLPTQQSQQSPRTLFPGGYKRPEIKVPSIVLQLYPDDVLRDG----ALDFLDKALSK 105

Query: 395 WVGIVLLDG 421
           WVGIV+L+G
Sbjct: 106 WVGIVVLNG 114


>ref|XP_004167583.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101213431
           [Cucumis sativus]
          Length = 924

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 5/78 (6%)
 Frame = +2

Query: 200 LNSLGVNSFESNEK-----QKQQPRTLFPGGFKRPEIKVPGLILRLSTNDVLKNGKNVDV 364
           +NS+  N F+S++      +K QPRTLFP GFKRPEIKVP ++L+L   +VL      D 
Sbjct: 46  INSVSENPFQSSQSIPKTPEKPQPRTLFPSGFKRPEIKVPCVVLQLDAAEVLAGD---DA 102

Query: 365 LDCVDVAVSKWVGIVLLD 418
           LD VD AVSKWVGIV+L+
Sbjct: 103 LDLVDRAVSKWVGIVVLN 120


>ref|XP_004140223.1| PREDICTED: uncharacterized protein LOC101213431 [Cucumis sativus]
          Length = 924

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 5/78 (6%)
 Frame = +2

Query: 200 LNSLGVNSFESNEK-----QKQQPRTLFPGGFKRPEIKVPGLILRLSTNDVLKNGKNVDV 364
           +NS+  N F+S++      +K QPRTLFP GFKRPEIKVP ++L+L   +VL      D 
Sbjct: 46  INSVSENPFQSSQSIPKTPEKPQPRTLFPSGFKRPEIKVPCVVLQLDAAEVLAGD---DA 102

Query: 365 LDCVDVAVSKWVGIVLLD 418
           LD VD AVSKWVGIV+L+
Sbjct: 103 LDLVDRAVSKWVGIVVLN 120


>ref|XP_002307580.1| predicted protein [Populus trichocarpa] gi|222857029|gb|EEE94576.1|
           predicted protein [Populus trichocarpa]
          Length = 604

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/58 (62%), Positives = 46/58 (79%)
 Frame = +2

Query: 248 QQPRTLFPGGFKRPEIKVPGLILRLSTNDVLKNGKNVDVLDCVDVAVSKWVGIVLLDG 421
           QQPRTLFPGG+KRPEIKVP ++L+L   DV++ G   + LD +D AVSK VGIV+L+G
Sbjct: 3   QQPRTLFPGGYKRPEIKVPNIVLQLDPEDVIRGGS--EALDLIDKAVSKSVGIVILNG 58


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