BLASTX nr result

ID: Coptis21_contig00031261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031261
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arab...    63   2e-08

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
 Frame = -2

Query: 301  REARVAGFIEDGQWQIPNQFRIHCSELIQEMENEVKLHSGQ-DEVVWFVTLRGDYQLKET 125
            + A+V   I++ +W+ P    I    +I+ + +      GQ DE++W  +    + +K  
Sbjct: 803  KNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIIWLDSPNHRFSVKVA 862

Query: 124  YHSMRKTKQKINWHGMVWFANRIPRFSFITWLVLSDGLKT 5
            +  +R+ +Q + WH +VWF N +PR SF+ W+V+   L T
Sbjct: 863  WEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTT 902


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = -2

Query: 301 REARVAGFIEDGQWQIPNQFRIHCSELIQEMENEVKLHSGQ-DEVVWFVTLRGDYQLKET 125
           + A+V   I++ +W+ P    I    +I+ + +      GQ DE+VW  +    + +K  
Sbjct: 88  KNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFSVKVA 147

Query: 124 YHSMRKTKQKINWHGMVWFANRIPRFSFITWLVLSDGLKT 5
           +  +R+ +  + WH +VWF N +PR SF+ W+V+   L T
Sbjct: 148 WEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTT 187


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = -2

Query: 301 REARVAGFIEDGQWQIPNQFRIHCSELIQEMENEVKLHSGQ-DEVVWFVTLRGDYQLKET 125
           + A+V   I++ +W+ P    I    +I+ + +      GQ DE+VW  +    + +K  
Sbjct: 270 KNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVA 329

Query: 124 YHSMRKTKQKINWHGMVWFANRIPRFSFITWLVLSDGLKT 5
           +  +R+ +Q + WH +VWF N +PR SF+ W+ +   L T
Sbjct: 330 WEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTT 369


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = -2

Query: 301  REARVAGFIEDGQWQIPNQFRIHCSELIQEMENEVKLHSGQ-DEVVWFVTLRGDYQLKET 125
            + A+V   I++ +W+ P    I    +I+ + +      GQ DE+VW  +    + +K  
Sbjct: 1143 KNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFLVKVA 1202

Query: 124  YHSMRKTKQKINWHGMVWFANRIPRFSFITWLVLSDGLKT 5
            +  +R+ +Q + WH +VWF N +PR SF+ W+ +   L T
Sbjct: 1203 WEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTT 1242


>ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arabidopsis lyrata subsp.
           lyrata] gi|297311371|gb|EFH41795.1| hypothetical protein
           ARALYDRAFT_917542 [Arabidopsis lyrata subsp. lyrata]
          Length = 227

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
 Frame = -2

Query: 301 REARVAGFIEDGQWQIP---NQFRIHCSELIQEMENEVKLHSGQDEVVWFVTLR---GDY 140
           R + VA  ++  QW++    +Q   +    +QE+    +   G D+ +W  TL      +
Sbjct: 5   RHSTVANAVQGTQWRVRRCRSQTLRNVVTKLQEIAPPQRA-KGPDKPLWRYTLDDYDSSF 63

Query: 139 QLKETYHSMRKTKQKINWHGMVWFANRIPRFSFITWLVLSDGLKT 5
             + T++ +RK K K+ WH  VWF  R+PR+SFI WL + D L T
Sbjct: 64  TSRHTWNLLRKAKHKVLWHNSVWFPQRVPRYSFIVWLAVKDQLST 108


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