BLASTX nr result

ID: Coptis21_contig00031253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00031253
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525401.1| conserved hypothetical protein [Ricinus comm...   158   1e-36
ref|XP_003519825.1| PREDICTED: uncharacterized protein LOC100801...   147   2e-33
ref|XP_002265658.2| PREDICTED: uncharacterized protein LOC100249...   147   3e-33
ref|XP_003517720.1| PREDICTED: uncharacterized protein LOC100804...   140   4e-31
ref|XP_004143065.1| PREDICTED: uncharacterized protein LOC101210...   132   8e-29

>ref|XP_002525401.1| conserved hypothetical protein [Ricinus communis]
           gi|223535364|gb|EEF37039.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 581

 Score =  158 bits (400), Expect = 1e-36
 Identities = 106/288 (36%), Positives = 148/288 (51%), Gaps = 41/288 (14%)
 Frame = +2

Query: 8   RSLGLSEQFISTKSRVFSGFGLGVIASVILLTVLFLNHPLKASLLY-PVVQGFSSTKS-- 178
           + L L +Q +S K +V SGF L V AS+I+L+VL L++ LK  ++  P+ QGF+S  S  
Sbjct: 5   KKLALPDQVLSPKRKVLSGFVLWVGASLIILSVLLLSNSLKGRVVITPLFQGFNSVNSVN 64

Query: 179 --PLVSWPFQFSSR-------NKTAQEGILKEVSKNSSFTGFNDGNLVSKK--------- 304
              LVSWPF F S        N    E IL++    +S     +G++   K         
Sbjct: 65  SSSLVSWPFSFPSSYLPSSVANNDTLEVILEKTHLGNSTDDIENGSISVDKATVQEKTEN 124

Query: 305 SQSGNF---TGNEKNITVMVVEKTYQRNLSREVNSTN----------------SSFVDRN 427
           S+ GNF   +G   N +V  +E T   N S  + + +                  ++D N
Sbjct: 125 SKGGNFLDSSGGHGNGSV--IENTNLGNFSDMLKNGSLHGEDEIFIGNFSVSIDGYLDAN 182

Query: 428 KEKNVTDRGGESGRSNNGTKESVIESGHEQNLT-KEHILTSSFNDSGIGNDDFEKCDIFD 604
           +        G+S  + N    +V++   + NL   E +      +    N   E CDIFD
Sbjct: 183 RSIE-----GKSLENFNDVNNTVLDDKDKDNLIYNEELGRFRGGEEENRNASSETCDIFD 237

Query: 605 GRWVRDDKKPLYPAGSCPHIDRDFDCHLNGRPDEHFVKWRW*PNHCNI 748
           G+WVRDD KP YPAGSCPHIDRDF+CHLNGRPD+ FVKW+W PN C+I
Sbjct: 238 GQWVRDDSKPYYPAGSCPHIDRDFECHLNGRPDDGFVKWKWQPNRCSI 285


>ref|XP_003519825.1| PREDICTED: uncharacterized protein LOC100801114 [Glycine max]
          Length = 535

 Score =  147 bits (372), Expect = 2e-33
 Identities = 96/253 (37%), Positives = 136/253 (53%), Gaps = 6/253 (2%)
 Frame = +2

Query: 8   RSLGLSEQFISTKSRVFSGFGLGVIASVILLTVLFLNHPLKASLLYPVVQGF-----SST 172
           + L  SE F+S + +V SGF LGV  S++ LT++ LN+    SL  P VQ F     S++
Sbjct: 6   KRLAFSEPFMSQRRKVISGFSLGVGVSLLFLTLILLNN---TSLSVPKVQVFLQGSDSNS 62

Query: 173 KSPLVSWPFQFSSR-NKTAQEGILKEVSKNSSFTGFNDGNLVSKKSQSGNFTGNEKNITV 349
            S   SW F F++  +  A    L  V  N S +  ++ +  S+++  GN TG++KN ++
Sbjct: 63  SSSSFSWRFPFTTTLSSNASVSPLHRVEVNVSSSEGSEKS--SEETLLGNLTGDQKNASL 120

Query: 350 MVVEKTYQRNLSREVNSTNSSFVDRNKEKNVTDRGGESGRSNNGTKESVIESGHEQNLTK 529
               +    +     N T +  V  N +       G S  +  G+     E G    L K
Sbjct: 121 HDGHEEDDEHCCSLKNVTLA--VKENAQV------GNSSCNGGGSGVGKCEDGL---LMK 169

Query: 530 EHILTSSFNDSGIGNDDFEKCDIFDGRWVRDDKKPLYPAGSCPHIDRDFDCHLNGRPDEH 709
           E     S + SG+      +CDIFDG+WVRD+ KP YP GSCPH+DRDFDCHLNGRPD  
Sbjct: 170 ESNNNDSISVSGL----LGECDIFDGKWVRDESKPYYPLGSCPHVDRDFDCHLNGRPDSE 225

Query: 710 FVKWRW*PNHCNI 748
           +VKW+W PN C+I
Sbjct: 226 YVKWKWQPNGCDI 238


>ref|XP_002265658.2| PREDICTED: uncharacterized protein LOC100249925 [Vitis vinifera]
          Length = 623

 Score =  147 bits (370), Expect = 3e-33
 Identities = 110/329 (33%), Positives = 152/329 (46%), Gaps = 82/329 (24%)
 Frame = +2

Query: 8   RSLGLSEQFISTKSRVFSGFGLGVIASVILLTVLFLNHPLKASLLYPVVQGFSS---TKS 178
           + LG SEQ +S K +V SGF LG+ AS+I+LT++  N     S   P+ +GFS+   + S
Sbjct: 4   KKLGFSEQILSPKRKVVSGFALGLGASLIVLTIVSFN----TSFNVPMFRGFSNFGASNS 59

Query: 179 PLVSWPFQFSSRNKTAQEGILKEVSKNSSFT---GFNDGNLVSKKSQSGNFTGNEKNITV 349
            L SW F FSS + +        +  + S     G  DG +V    Q+ + +G +K+   
Sbjct: 60  SLASWSFSFSSTSSSTASPTNATLDFHDSADFKQGTEDGRVVDSTPQA-SLSGMDKDGDP 118

Query: 350 M--VVEKTYQRNLSREVNS----------------------TNSSFVDRNKEKNVTDR-- 451
           +  V+EKT+  N S  V +                      T +S  + N E   +D   
Sbjct: 119 LGIVLEKTHLGNTSEMVKNGSFTVDGGWIPETTHADASGTATKASLSNSNVEGMTSDMAI 178

Query: 452 -GGESGRSNNGT---------------------KESVIESGHEQNLTK--EHILTSSFND 559
            G  S   NNG+                     K  V E+ +  NL+   E+    +  +
Sbjct: 179 LGNSSEMVNNGSSPGEEGTVIGKTGLGGNTSDGKIFVAENNNVGNLSYSGEYTKPPTEEE 238

Query: 560 SGIGNDDFEK--------------------------CDIFDGRWVRDDKKPLYPAGSCPH 661
           SG   +D  K                          CDIFDGRWVRDD KP YPAGSCP+
Sbjct: 239 SGTAGNDAGKATTNNKITATHYHSQLKKMPNSFYGGCDIFDGRWVRDDSKPYYPAGSCPY 298

Query: 662 IDRDFDCHLNGRPDEHFVKWRW*PNHCNI 748
           IDRDFDCHLNGRPD+ ++KWRW PN C+I
Sbjct: 299 IDRDFDCHLNGRPDDDYLKWRWQPNGCDI 327


>ref|XP_003517720.1| PREDICTED: uncharacterized protein LOC100804622 [Glycine max]
          Length = 525

 Score =  140 bits (352), Expect = 4e-31
 Identities = 88/248 (35%), Positives = 125/248 (50%), Gaps = 1/248 (0%)
 Frame = +2

Query: 8   RSLGLSEQFISTKSRVFSGFGLGVIASVILLTVLFLNHP-LKASLLYPVVQGFSSTKSPL 184
           + L  SE F+S   +V SGF LGV  S++ LT++ LN   L    +   +QG  S  +  
Sbjct: 5   KRLTFSEPFMSQGRKVISGFSLGVGVSLLFLTLILLNSTSLSVPKVQVFLQGSDSNSTSS 64

Query: 185 VSWPFQFSSRNKTAQEGILKEVSKNSSFTGFNDGNLVSKKSQSGNFTGNEKNITVMVVEK 364
            SW F F++    +  G +  + +       ++G   S+K+  GN TG++KN ++    +
Sbjct: 65  FSWRFPFTTA--LSSNGSVSSLHRVDVRVSSSEG---SEKTLLGNLTGDQKNASLYDGHE 119

Query: 365 TYQRNLSREVNSTNSSFVDRNKEKNVTDRGGESGRSNNGTKESVIESGHEQNLTKEHILT 544
             +   S                KNVT  G E+    N +         E  L    +  
Sbjct: 120 EDEHCCSL---------------KNVTLAGKENAHVGNSSCNGDGVGKCEDGL----LFK 160

Query: 545 SSFNDSGIGNDDFEKCDIFDGRWVRDDKKPLYPAGSCPHIDRDFDCHLNGRPDEHFVKWR 724
            S NDS        +CDIFDG+WVRD+ KP YP GSCP++DRDFDCHLNGRPD  +VKW+
Sbjct: 161 ESNNDSVSVGGLLGECDIFDGKWVRDEFKPYYPLGSCPNVDRDFDCHLNGRPDSDYVKWK 220

Query: 725 W*PNHCNI 748
           W PN C+I
Sbjct: 221 WQPNGCDI 228


>ref|XP_004143065.1| PREDICTED: uncharacterized protein LOC101210768 [Cucumis sativus]
           gi|449494592|ref|XP_004159591.1| PREDICTED:
           uncharacterized LOC101210768 [Cucumis sativus]
          Length = 553

 Score =  132 bits (332), Expect = 8e-29
 Identities = 87/261 (33%), Positives = 123/261 (47%), Gaps = 14/261 (5%)
 Frame = +2

Query: 8   RSLGLSEQFISTKSRVFSGFGLGVIASVILLTVLFLNHPLKASLLYPVVQGFSSTKSPLV 187
           R LG  EQ +S + RV  GFGLG+  S+I+L+ L L         + +     S  S   
Sbjct: 4   RKLGFPEQILSPRRRVVPGFGLGISLSLIVLSFLLLYTSSHGKFFFSLYDQPPSVDSLFS 63

Query: 188 SWPFQFSSRNKTAQEGILKEVSKNSSFTGFNDGNLVSKKSQSGNFTGNEKNITVMVVEKT 367
           SW F FSS + +           +S+   ++D +L S+     N T    N T+ +   +
Sbjct: 64  SWSFSFSSPSFSPF------TPNSSNLPTYDDPSLPSQFPPFPNHTHRHNNATLQLNPHS 117

Query: 368 YQRNLSREVNSTNSSFVDRNKEKNVTDRGGESGRSNNGT--KESVIESGHEQNLTKE--- 532
              +L    N+T     + + + N       S  +N     K++   S  + N+  +   
Sbjct: 118 PNASLFPP-NATLFDIPELDTQHNFPPSNSTSLNTNTTRYPKDTNHSSNAQGNMPSQPNG 176

Query: 533 ------HILTSSFNDSGIGNDD---FEKCDIFDGRWVRDDKKPLYPAGSCPHIDRDFDCH 685
                 H +  S N   +   D   +E CDIFDG WVRDD KP YP GSCP IDRDFDC 
Sbjct: 177 GATNSSHTIEISNNTQPLLTSDDSFYEDCDIFDGEWVRDDSKPYYPLGSCPFIDRDFDCD 236

Query: 686 LNGRPDEHFVKWRW*PNHCNI 748
           LN RPD+ +VKW+W P  CNI
Sbjct: 237 LNKRPDDGYVKWKWQPYGCNI 257


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